Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03487 and RBAM_021550
See
DNA alignment /
Visit
BSNT_03487 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_03487___spoVAA.1.9828.seq
# -bsequence pep-align/RBAM_021550___spoVAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03487___spoVAA-RBAM_021550___spoVAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03487___spoVAA-RBAM_021550___spoVAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03487___spoVAA
# 2: RBAM_021550___spoVAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 176/207 (85.0%)
# Similarity: 193/207 (93.2%)
# Gaps: 1/207 ( 0.5%)
# Score: 927.0
#
#
#=======================================
BSNT_03487___ 1 MMERRIFIRLRHRVLAHPGDIITVGDAAQIEGQLQLKKKLSAMPLYQVSE 50
||||||:||||||.||.|||||:||||||.||.:|||||||:|||:|::
RBAM_021550__ 1 -MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTK 49
BSNT_03487___ 51 KDKNIVILDIIQVLRAIHLQDPTLDVQTVGGAETIVEIQYRKRNLSTVLF 100
||||||:||||:||:.||...|.|||||||||||||||.|:|:.||.|||
RBAM_021550__ 50 KDKNIVVLDIIKVLKTIHTAFPALDVQTVGGAETIVEIHYQKKQLSAVLF 99
BSNT_03487___ 101 IGVWLLLFIGSCLAIMNFHEDVSMRDVHIALYEIITGERNDYPYLLQIPY 150
:||||||||||||||||||||||||:||||||||||||||:|||||||||
RBAM_021550__ 100 VGVWLLLFIGSCLAIMNFHEDVSMREVHIALYEIITGERNEYPYLLQIPY 149
BSNT_03487___ 151 SIGLGLGMIVFFNHIFKKRLNEEPSPLEVEMFNYQLDLDQYVAMHENQET 200
|||||||||||||||||||||||||||||||||||||||.|||||||:||
RBAM_021550__ 150 SIGLGLGMIVFFNHIFKKRLNEEPSPLEVEMFNYQLDLDHYVAMHENEET 199
BSNT_03487___ 201 IKDLHDR 207
:||||||
RBAM_021550__ 200 MKDLHDR 206
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.