Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03486 and RBAM_021540

See DNA alignment / Visit BSNT_03486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_03486___spoVAB.1.9828.seq
#    -bsequence pep-align/RBAM_021540___spoVAB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03486___spoVAB-RBAM_021540___spoVAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03486___spoVAB-RBAM_021540___spoVAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03486___spoVAB
# 2: RBAM_021540___spoVAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     123/141 (87.2%)
# Similarity:   133/141 (94.3%)
# Gaps:           0/141 ( 0.0%)
# Score: 629.0
# 
#
#=======================================

BSNT_03486___      1 MIVSVLFIIFVGLGGGITVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYE     50
                     ||||:||::|||||||:|||||||||||||||||||||||||||||||||
RBAM_021540__      1 MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYE     50

BSNT_03486___     51 AAVILGAVCGGWETLHMNHLYLTKWIAVPVGLLAGLFVGMLAAALTEVLN    100
                     .|||.|||.||||||:|||.:|::|:|||||||||:||||||||||||||
RBAM_021540__     51 GAVISGAVFGGWETLNMNHFFLSEWLAVPVGLLAGMFVGMLAAALTEVLN    100

BSNT_03486___    101 VLPILAKRIGLRSKIIILLMAIVIGKIAGSLFHWLYFIDHS    141
                     ||||||||||..|||||||||||.||||||||||||||.||
RBAM_021540__    101 VLPILAKRIGFGSKIIILLMAIVFGKIAGSLFHWLYFIHHS    141


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