Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03485 and RBAM_021530

See DNA alignment / Visit BSNT_03485 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_03485___spoVAC.1.9828.seq
#    -bsequence pep-align/RBAM_021530___spoVAC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03485___spoVAC-RBAM_021530___spoVAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03485___spoVAC-RBAM_021530___spoVAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03485___spoVAC
# 2: RBAM_021530___spoVAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     135/150 (90.0%)
# Similarity:   144/150 (96.0%)
# Gaps:           0/150 ( 0.0%)
# Score: 706.0
# 
#
#=======================================

BSNT_03485___      1 MTNIKENYKSKVKTYQPKPPYVWNCVKAFLVGGLICAIGQGLQNFYIHFF     50
                     |||:|||||:|||.||||||||||||||||:|||||.|||.||:||||||
RBAM_021530__      1 MTNLKENYKTKVKDYQPKPPYVWNCVKAFLIGGLICLIGQALQDFYIHFF     50

BSNT_03485___     51 DFNEKTAGNPTAATLILISALLTGFGIYDRIGQFAGAGSAVPVTGFANSM    100
                     :|||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_021530__     51 NFNEKTAGNPTAATLILISALLTGFGIYDRLGQFAGAGSAVPVTGFANSM    100

BSNT_03485___    101 ASAALEYKSEGLVLGVATNMFKLAGNVIVFGVVAAYIVGMIRFAFEKLMS    150
                     .|||||::|||||||||||||||||||||||||||||||:||||.|||.|
RBAM_021530__    101 TSAALEHRSEGLVLGVATNMFKLAGNVIVFGVVAAYIVGLIRFACEKLFS    150


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