Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03483 and RBAM_021520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_03483___spoVAD.1.9828.seq
# -bsequence pep-align/RBAM_021520___spoVAD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03483___spoVAD-RBAM_021520___spoVAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03483___spoVAD-RBAM_021520___spoVAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03483___spoVAD
# 2: RBAM_021520___spoVAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 306/338 (90.5%)
# Similarity: 324/338 (95.9%)
# Gaps: 0/338 ( 0.0%)
# Score: 1619.0
#
#
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BSNT_03483___ 1 MKLTGKQTWVFEHPIFVNSAGTAAGPKEKDGPLGSLFDKTYDEMHCNQKS 50
||||||||||||:|:|||:|||||||||||||:||||||||||||||||:
RBAM_021520__ 1 MKLTGKQTWVFENPLFVNAAGTAAGPKEKDGPIGSLFDKTYDEMHCNQKN 50
BSNT_03483___ 51 WEMAERQLMEDAVNVALQKNNLTKDDIDLLLAGDLLNQNVTANYVARHLK 100
||||||||||||:|.||||.||.|.|||||||||||||||||||||||||
RBAM_021520__ 51 WEMAERQLMEDAINSALQKQNLKKSDIDLLLAGDLLNQNVTANYVARHLK 100
BSNT_03483___ 101 IPFLCMFGACSTSMETVAVASALVDGGFAKRALAATSSHNATAERQFRYP 150
|||||:||||||||||:||||||:|||||.||:|||||||||||||||.|
RBAM_021520__ 101 IPFLCLFGACSTSMETIAVASALIDGGFANRAIAATSSHNATAERQFRNP 150
BSNT_03483___ 151 TEYGGQKPDTATSTVTGSGAVVISQTPGDIQITSATVGKVSDLGITDPFD 200
|||||||||||||||||.|||:|||.|.||:|||||||||||||||||||
RBAM_021520__ 151 TEYGGQKPDTATSTVTGGGAVIISQNPSDIKITSATVGKVSDLGITDPFD 200
BSNT_03483___ 201 MGSAMAPAAADTIKQHFKDLNRTADDYDLILTGDLSGVGSPIVKDILKED 250
||||||||||||||||.:|||||||||||||||||||||||||||:|||:
RBAM_021520__ 201 MGSAMAPAAADTIKQHLQDLNRTADDYDLILTGDLSGVGSPIVKDLLKEE 250
BSNT_03483___ 251 GYPVGTKHDDCGLLIYTPDQQVFAGGSGCACSAVVTYSHIFKQLREGNLN 300
|||||||||||||||||||||||||||||||||:|||:|||.||:.|.||
RBAM_021520__ 251 GYPVGTKHDDCGLLIYTPDQQVFAGGSGCACSALVTYTHIFNQLKAGTLN 300
BSNT_03483___ 301 RVFVVATGALLSPTMIQQKETIPTIAHGVVFERAGGAS 338
||.|||||||||||||||||||||||||||||||||||
RBAM_021520__ 301 RVLVVATGALLSPTMIQQKETIPTIAHGVVFERAGGAS 338
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