Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03483 and RBAM_021520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence dna-align/BSNT_03483___spoVAD.1.9828.seq
# -bsequence dna-align/RBAM_021520___spoVAD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03483___spoVAD-RBAM_021520___spoVAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03483___spoVAD-RBAM_021520___spoVAD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03483___spoVAD
# 2: RBAM_021520___spoVAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1022
# Identity: 782/1022 (76.5%)
# Similarity: 782/1022 (76.5%)
# Gaps: 10/1022 ( 1.0%)
# Score: 2909.0
#
#
#=======================================
BSNT_03483___ 1 ATGAAATTAACAGGAAAGCAAACCTGGGTATTTGAACATCCCATATTTGT 50
||||||||.||.|||||||||||||||||.||||||.|.||..|||||||
RBAM_021520__ 1 ATGAAATTGACCGGAAAGCAAACCTGGGTGTTTGAAAACCCGTTATTTGT 50
BSNT_03483___ 51 CAACTCAGCGGGAACGGCAGCAGGACCAAAGGAAAAAGACGGACCGCTCG 100
.||..|.|||||.||||||||.|||||.||.|||||||||||.|||.|||
RBAM_021520__ 51 AAATGCGGCGGGGACGGCAGCCGGACCGAAAGAAAAAGACGGCCCGATCG 100
BSNT_03483___ 101 GCTCTTTATTTGATAAAACCTATGACGAAATGCATTGTAATCAAAAAAGC 150
|.||..|.||||||||.||.||.||.|||||||||||.|||||.||||.|
RBAM_021520__ 101 GTTCGCTGTTTGATAAGACATACGATGAAATGCATTGCAATCAGAAAAAC 150
BSNT_03483___ 151 TGGGAAATGGCGGAACGGCAGCTGATGGAAGACGCTGTTAATGTTGCGCT 200
|||||||||||||||||.|||.|.||||||||.||..|.|| .|.||||
RBAM_021520__ 151 TGGGAAATGGCGGAACGTCAGTTAATGGAAGATGCCATCAA--CTCCGCT 198
BSNT_03483___ 201 T--CAAAAAAACAATCTGACAAAAGA-TGATATTGACCTATTGCTGGCAG 247
| ||||||.|.||..||| |||||| .||||||||..|.||.||.||.|
RBAM_021520__ 199 TTGCAAAAACAGAACTTGA-AAAAGAGCGATATTGATTTGTTACTCGCGG 247
BSNT_03483___ 248 GCGA-CTTGCTGAACCAAAACGTGACGGCTAACTATGTGGCAAGACACTT 296
|.|| ||| .|.||.|||||.|||||.||.|||||.||.||.|||||..|
RBAM_021520__ 248 GGGATCTT-TTAAATCAAAATGTGACCGCCAACTACGTCGCCAGACATCT 296
BSNT_03483___ 297 GAAAATCCCATTTCTTTGTATGTTTGGTGCCTGTTCAACATCAATGGAAA 346
||||||.||.||.||.|||.||||.||.||||||||.|||||||||||||
RBAM_021520__ 297 GAAAATTCCGTTCCTCTGTCTGTTCGGCGCCTGTTCGACATCAATGGAAA 346
BSNT_03483___ 347 CAGTTGCTGTCGCATCAGC-CTTAGTTGATGGCGGGTTTGCCAAAAGGGC 395
|..|||||||||||||.|| ||.| ||||.|||||.|||||.||..||||
RBAM_021520__ 347 CGATTGCTGTCGCATCTGCGCTCA-TTGACGGCGGTTTTGCGAACCGGGC 395
BSNT_03483___ 396 ACTCGCTGCCACTAGCAGTCACAATGCAACTGCGGAAAGACAGTTTCGCT 445
..||||.|||||.|||||.||.||.||.||.||.|||.|.||.||.|||.
RBAM_021520__ 396 GATCGCAGCCACGAGCAGCCATAACGCGACGGCAGAACGGCAATTCCGCA 445
BSNT_03483___ 446 ATCCGACAGAATACGGAGGCCAAAAACCGGACACTGCTACCTCCACTGTA 495
|||||||.||.||.||.||.|||||||||||.||.||.||.||.||.||.
RBAM_021520__ 446 ATCCGACGGAGTATGGCGGGCAAAAACCGGATACCGCCACTTCAACGGTC 495
BSNT_03483___ 496 ACCGGAAGCGGTGCAGTTGTCATCAGTCAGACACCGGGTGATATCCAAAT 545
||.||..||||.||.||..|||||||.||.|..||...|||||||.|.||
RBAM_021520__ 496 ACGGGGGGCGGGGCGGTCATCATCAGCCAAAACCCTTCTGATATCAAGAT 545
BSNT_03483___ 546 CACAAGTGCGACTGTCGGAAAGGTTTCTGATTTAGGAATTACAGACCCTT 595
.|||||.||.||.||.|||||.||....||..|.|||||.|||||.||.|
RBAM_021520__ 546 TACAAGCGCAACAGTAGGAAAAGTAAGCGACCTCGGAATAACAGATCCGT 595
BSNT_03483___ 596 TTGATATGGGATCGGCTATGGCTCCGGCTGCAGCTGATACAATTAAGCAG 645
|.|||||||||||.||.|||||.||.|||||.||.||.|||||.||.|||
RBAM_021520__ 596 TCGATATGGGATCCGCCATGGCGCCCGCTGCCGCCGACACAATCAAACAG 645
BSNT_03483___ 646 CACTTTAAAGATCTCAACCGGACAGCGGATGATTATGATCTAATCCTGAC 695
|||.|..|.||..|.|||||.||.|||||||||||||||||.||..|.||
RBAM_021520__ 646 CACCTGCAGGACTTGAACCGCACGGCGGATGATTATGATCTGATTTTAAC 695
BSNT_03483___ 696 AGGTGACCTGTCAGGCGTCGGTTCTCCAATCGTAAAAGACATCTTAAAAG 745
.||.|||||.|||||||||||.||.||.|||||.|||||..|..|.||||
RBAM_021520__ 696 GGGAGACCTTTCAGGCGTCGGCTCGCCGATCGTGAAAGATTTGCTCAAAG 745
BSNT_03483___ 746 AAGATGGATATCCAGTCGGCACAAAGCATGATGATTGCGGGCTTCTGATT 795
||||.||.|||||.||.||.||.||.||.|||||.|||||.|||||.||.
RBAM_021520__ 746 AAGAAGGCTATCCCGTGGGAACGAAACACGATGACTGCGGTCTTCTCATC 795
BSNT_03483___ 796 TACACTCCGGATCAGCAGGTCTTTGCCGGGGGGAGCGGCTGTGCTTGTTC 845
||.||.|||||.||||||||.|||||.||.||.||||||||.||.||.||
RBAM_021520__ 796 TATACGCCGGACCAGCAGGTGTTTGCGGGCGGAAGCGGCTGCGCCTGCTC 845
BSNT_03483___ 846 AGCGGTTGTCACCTACTCTCATATTTTTAAGCAGCTGAGAGAAGGAAATT 895
.|||.||||.||.|||.|.|||||||||||.||..|.|.||..||.|.|.
RBAM_021520__ 846 TGCGCTTGTTACGTACACACATATTTTTAATCAATTAAAAGCGGGGACTC 895
BSNT_03483___ 896 TAAACCGTGTATTTGTCGTAGCGACCGGGGCACTATTAAGCCCGACGATG 945
|||||.|.|||.|.||.||.|||||.|||||.||.|||||.|||||.|||
RBAM_021520__ 896 TAAACAGGGTACTCGTTGTCGCGACAGGGGCGCTTTTAAGTCCGACAATG 945
BSNT_03483___ 946 ATCCAGCAAAAAGAAACCATCCCGACTATCGCCCACGGGGTTGTATTTGA 995
||||||||.||.||||||||.|||||.|||||.|||||.||.||||||||
RBAM_021520__ 946 ATCCAGCAGAAGGAAACCATTCCGACCATCGCGCACGGTGTGGTATTTGA 995
BSNT_03483___ 996 GCGTGCAGGAGGTGCATCTTAA 1017
|||.||.|||||||||||.|||
RBAM_021520__ 996 GCGGGCGGGAGGTGCATCATAA 1017
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