Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03481 and RBAM_021500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_03481.1.9828.seq
# -bsequence pep-align/RBAM_021500___spoVAE1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03481-RBAM_021500___spoVAE1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03481-RBAM_021500___spoVAE1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03481
# 2: RBAM_021500___spoVAE1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 167/203 (82.3%)
# Similarity: 180/203 (88.7%)
# Gaps: 2/203 ( 1.0%)
# Score: 862.0
#
#
#=======================================
BSNT_03481 1 MTTKRKVILVTDGDVYAAKTIEYAASKVGGRCISQSKGNPSTRSGAELVK 50
.|||||||||||||||||||||||.|.|||||||||||||||||.|||:
RBAM_021500__ 1 -MTKRKVILVTDGDVYAAKTIEYAAEKAGGRCISQSKGNPSTRSGPELVQ 49
BSNT_03481 51 LIASAPYDPVFVMFDDSGLQGEGPGEAALTYVATHPSIEVLGVIAVASKT 100
||.:||.|||||||||||||||||||.||.|||:|..|||||||||||||
RBAM_021500__ 50 LIKAAPNDPVFVMFDDSGLQGEGPGETALKYVASHQDIEVLGVIAVASKT 99
BSNT_03481 101 HQAEWTRVDVSIDRNGEITEYGVDKVGEREFDDHRMSGDTVYCLDKLDLP 150
||||||:|||||||:||:||:||||.|.||.|:|||:|||||||||||:|
RBAM_021500__ 100 HQAEWTKVDVSIDRDGEVTEFGVDKTGMREMDEHRMNGDTVYCLDKLDVP 149
BSNT_03481 151 LIVGIGDIGKMGRKDDISKGSPITMKAVEFILERSGYHAGPQGRENSGLS 200
|||||||||||||||||||||||||||||||||||..|||..|:.:.|:.
RBAM_021500__ 150 LIVGIGDIGKMGRKDDISKGSPITMKAVEFILERSESHAGKTGKHDQGVP 199
BSNT_03481 201 ESS 203
.|
RBAM_021500__ 200 GS- 201
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