Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03481 and RBAM_021500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence dna-align/BSNT_03481.1.9828.seq
# -bsequence dna-align/RBAM_021500___spoVAE1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03481-RBAM_021500___spoVAE1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03481-RBAM_021500___spoVAE1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03481
# 2: RBAM_021500___spoVAE1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 622
# Identity: 471/622 (75.7%)
# Similarity: 471/622 (75.7%)
# Gaps: 26/622 ( 4.2%)
# Score: 1749.0
#
#
#=======================================
BSNT_03481 1 ATGACGACAAAACGCAAGGTCATACTGGTAACAGACGGGGATGTTTATGC 50
|||||| |||||.||||||||.||.||.|||||||||||.||.||.||
RBAM_021500__ 1 ATGACG---AAACGGAAGGTCATTCTTGTGACAGACGGGGACGTATACGC 47
BSNT_03481 51 CGCTAAAACAATTGAATACGCCGC--AAGCAAAGTGGGAGGCCGATGCAT 98
|||.||||||||||||||.||||| || ||||..||.||.||.||.||
RBAM_021500__ 48 CGCCAAAACAATTGAATATGCCGCGGAA--AAAGCAGGCGGACGGTGTAT 95
BSNT_03481 99 TTCACAATCAAAAGGGAATCCTTCCACCCGCAGCGGCGCCGAGCTTGTCA 148
|||.|||||||||||.|||||.||.||..|.||||||.||||.|||||..
RBAM_021500__ 96 TTCCCAATCAAAAGGCAATCCGTCAACGAGAAGCGGCCCCGAACTTGTTC 145
BSNT_03481 149 AGCTGAT---CGCCTCAGCACCGTATGATCCTGTATTTGTCATGTTTGAC 195
||||||| .||| ||.|||.||||.||.||.|||||||||||||||
RBAM_021500__ 146 AGCTGATTAAAGCC---GCGCCGAATGACCCGGTGTTTGTCATGTTTGAC 192
BSNT_03481 196 GACTCCGGCCTTCAAGGAGAGGGTCCGGGAGAAGCCGCTCTAACCTATGT 245
||.||.|||||.|||||.||.||.|||||.|||.|.||.||.|..|||||
RBAM_021500__ 193 GATTCAGGCCTGCAAGGGGAAGGGCCGGGCGAAACGGCGCTGAAATATGT 242
BSNT_03481 246 CGCAACCCATCCGTCTATTGAAGTGCTCGGTGTGATTGCGGTCGCGTCAA 295
|||..|.||||.|...|||||||||||.||.||||||||||||||.||.|
RBAM_021500__ 243 CGCCTCACATCAGGACATTGAAGTGCTGGGGGTGATTGCGGTCGCTTCTA 292
BSNT_03481 296 AAACACATCAGGCTGAATGGACCAGGGTCGATGTAAGCATTGACCGCAAT 345
|.||.|||||||||||||||||.|..||||||||...|||||||||..||
RBAM_021500__ 293 AGACCCATCAGGCTGAATGGACGAAAGTCGATGTCTCCATTGACCGTGAT 342
BSNT_03481 346 GGAGAAATAACTGAATACGGCGTCGATAAAGTCGGGGAA--AGGGAATTT 393
||||||.|.||.||.|..||||||||||||..| |||| ||.|||.|.
RBAM_021500__ 343 GGAGAAGTGACGGAGTTTGGCGTCGATAAAACC--GGAATGAGAGAAATG 390
BSNT_03481 394 GATGACCACAGAATGAGTGGAGATACAGTCTATTGCCTTGATAAACTTGA 443
||.||.||||||||||.|||||||||.||.|||||.||.||||||.|.||
RBAM_021500__ 391 GACGAGCACAGAATGAATGGAGATACGGTGTATTGTCTGGATAAATTGGA 440
BSNT_03481 444 TCTCCCACTTATTGTCGGTATCGGGGATATCGGCAAAATGGGCAGAAAAG 493
..|.||.||.|||||.||.|||||.||.||.||.||.|||||.|||||||
RBAM_021500__ 441 CGTTCCCCTCATTGTGGGCATCGGCGACATAGGTAAGATGGGAAGAAAAG 490
BSNT_03481 494 ACGATATCTCAAAAGGGTCGCCAATCACCATGAAAGCGGTCGAGTTTATT 543
|.||.||.||.|||||.|||||.|||||.|||||.||||||||.||.|||
RBAM_021500__ 491 ATGACATATCCAAAGGCTCGCCGATCACGATGAAGGCGGTCGAATTCATT 540
BSNT_03481 544 TTAGAAAGGAGCGGGTATCATGCCGGACCACAA--GGAAGAGAAAATTCG 591
|||||||||||||.....||||||||| |.|| ||||.|.|..||...
RBAM_021500__ 541 TTAGAAAGGAGCGAAAGCCATGCCGGA--AAAACCGGAAAACATGATCAA 588
BSNT_03481 592 GGTTTATCGGAATCC-AGCTAA 612
|||.||.|||.|||| ||
RBAM_021500__ 589 GGTGTACCGGGATCCTAG---- 606
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