Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03479 and RBAM_021480
See
DNA alignment /
Visit
BSNT_03479 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_03479___lysA.1.9828.seq
# -bsequence pep-align/RBAM_021480___lysA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03479___lysA-RBAM_021480___lysA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03479___lysA-RBAM_021480___lysA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03479___lysA
# 2: RBAM_021480___lysA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 388/441 (88.0%)
# Similarity: 420/441 (95.2%)
# Gaps: 2/441 ( 0.5%)
# Score: 2056.0
#
#
#=======================================
BSNT_03479___ 1 MTLFLHGTSRQNQHGHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSF 50
:|||||||||:.|||||||||||||||.||||||||||||||||||||
RBAM_021480__ 1 --MFLHGTSRQNKLGHLEIGGVDALYLAEHYGTPLYVYDVALIRERAKSF 48
BSNT_03479___ 51 KQAFIFAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSGGELYTAVAA 100
|||||.|.||||||||||||||||||||||:|||||||||||||:|||||
RBAM_021480__ 49 KQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSGGELFTAVAA 98
BSNT_03479___ 101 GFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGH 150
||||:||||||||||.|||:|||:|:||||||||||||:||.:||:::|.
RBAM_021480__ 99 GFPADRIHFHGNNKSEEELKMALDHQIGCIVVDNFYEISLLAELCRKSGR 148
BSNT_03479___ 151 SIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEH 200
::|||||||||||||||||||||||||||||||||||.|:||||||||:|
RBAM_021480__ 149 TMDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDH 198
BSNT_03479___ 201 IQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGG 250
|:||||||||||||||||||||||||||.||:|||:|:.|||:|||||||
RBAM_021480__ 199 IRLLGVHCHIGSQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGG 248
BSNT_03479___ 251 FGIRYTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGD 300
|||||||:|||||...|||||||||||||:.:.|||||||||||||||||
RBAM_021480__ 249 FGIRYTEEDEPLHPAVYVEKIIEAVKENAALHAFDIPEIWIEPGRSLVGD 298
BSNT_03479___ 301 AGTTLYTVGSQKEVPGVRQYVAVDGGMNDNIRPALYQAKYEAAAANRIGE 350
|||||||:||||||||.|:|.||||||:||||||||||||||.:||||||
RBAM_021480__ 299 AGTTLYTIGSQKEVPGTRKYAAVDGGMSDNIRPALYQAKYEAVSANRIGE 348
BSNT_03479___ 351 AHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGAYGYSMANNY 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021480__ 349 HHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGAYGYSMANNY 398
BSNT_03479___ 401 NRIPRPAVVFVENGEAHLVVKRETYEDIVKLDLPFKTGVKQ 441
||||||||||||:||||||::||||||||||||||||||||
RBAM_021480__ 399 NRIPRPAVVFVEDGEAHLVIRRETYEDIVKLDLPFKTGVKQ 439
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.