Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03474 and RBAM_021460

See DNA alignment / Visit BSNT_03474 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03474___ppiB.1.9828.seq
#    -bsequence pep-align/RBAM_021460___ppiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03474___ppiB-RBAM_021460___ppiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03474___ppiB-RBAM_021460___ppiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03474___ppiB
# 2: RBAM_021460___ppiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     125/143 (87.4%)
# Similarity:   129/143 (90.2%)
# Gaps:           0/143 ( 0.0%)
# Score: 671.0
# 
#
#=======================================

BSNT_03474___      1 MKTGYILMENGNKLEFELYDEAAPGTVANFEKLANEGFYDGVTFHRVIPG     50
                     ||||||.||||:::|||||...||.||||||.|||.||||||.|||||||
RBAM_021460__      1 MKTGYIEMENGSRIEFELYPNEAPNTVANFENLANTGFYDGVIFHRVIPG     50

BSNT_03474___     51 FVSQGGDPTGTGMGGPGYTIKCETEGNPHTHEAGSLSMAHAGKDTGGSQF    100
                     |||||||||||||||.|.|||||||||||.||||||||||||||||.|||
RBAM_021460__     51 FVSQGGDPTGTGMGGSGKTIKCETEGNPHKHEAGSLSMAHAGKDTGSSQF    100

BSNT_03474___    101 FIVHEPQPHLNGVHTVFGKVTSGLEFAKNMSNGDVMKEVRVEG    143
                     |||||||||||||||||||||||||.||||||||.|||:||||
RBAM_021460__    101 FIVHEPQPHLNGVHTVFGKVTSGLEHAKNMSNGDKMKEIRVEG    143


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