Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03474 and RBAM_021460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03474___ppiB.1.9828.seq
# -bsequence dna-align/RBAM_021460___ppiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03474___ppiB-RBAM_021460___ppiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03474___ppiB-RBAM_021460___ppiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03474___ppiB
# 2: RBAM_021460___ppiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 351/437 (80.3%)
# Similarity: 351/437 (80.3%)
# Gaps: 10/437 ( 2.3%)
# Score: 1398.5
#
#
#=======================================
BSNT_03474___ 1 ATGAAAACAGGTTACATTTTAATGGAAAATGGCAACAAACTTGAATTTGA 50
||||||||.||||||||...|||||||||.||||.||.|.||||||||||
RBAM_021460__ 1 ATGAAAACTGGTTACATCGAAATGGAAAACGGCAGCAGAATTGAATTTGA 50
BSNT_03474___ 51 ACTTTA--CG-ATGAAGCAGCTCCGGGTACAGTAGCTAACTTTGAAAAGC 97
|||||| || |||| |||.||...||||||.||||||||||||||.|
RBAM_021460__ 51 ACTTTATCCGAATGA---AGCGCCTAATACAGTCGCTAACTTTGAAAACC 97
BSNT_03474___ 98 TTGCGAATGAAGGCTTTTATGATGGTGTAACTTTCCACCGAGTAATTCCA 147
|.||||||...|||||||||||.||.||.|.|||||||||.||.|||||.
RBAM_021460__ 98 TGGCGAATACGGGCTTTTATGACGGCGTTATTTTCCACCGCGTGATTCCG 147
BSNT_03474___ 148 GGTTTCGTAAGCCAAGGGGGAGATCCTACTGGAACAGGGATGGGTGGCCC 197
||.||.||.||||||||.||||||||.|||||.|||||.|||||.||...
RBAM_021460__ 148 GGCTTTGTCAGCCAAGGCGGAGATCCGACTGGGACAGGCATGGGCGGAAG 197
BSNT_03474___ 198 AGGTTACACAATCAAATGTGAAACAGAAGGAAATCCGCATACACATGAAG 247
.||..|.||.||||||||||||||||||||.||||||||||..||.||||
RBAM_021460__ 198 CGGAAAAACGATCAAATGTGAAACAGAAGGCAATCCGCATAAGCACGAAG 247
BSNT_03474___ 248 CGGGCTCTCTTTCTATGGCACATGCCGGAAAAGACACTGGCGGCAGCCAA 297
|.||.|||.|.||.|||||.||||||||.||||||||.||....||||||
RBAM_021460__ 248 CCGGTTCTTTATCAATGGCGCATGCCGGTAAAGACACGGGTTCAAGCCAA 297
BSNT_03474___ 298 TTTTTCATCGTTCATGAGCCACAGCCTCATTTGAACGGTGTTCACACTGT 347
||.||||||||.||||||||.|||||.|||||.|||||.|||||.|||||
RBAM_021460__ 298 TTCTTCATCGTACATGAGCCGCAGCCGCATTTAAACGGCGTTCATACTGT 347
BSNT_03474___ 348 ATTCGGTAAAGTAACAAGCGGATTAGA--ATTCGCGAAAAACATGTCTAA 395
||||||.|||||.||||||||.||||| || |||||||||||||||||
RBAM_021460__ 348 ATTCGGAAAAGTGACAAGCGGTTTAGAGCAT--GCGAAAAACATGTCTAA 395
BSNT_03474___ 396 CGGCGATGTCATGAAAGAAGTTCGCGTAGAAGGCTAA 432
|||.||....|||||||||.|.||.||||||||.|||
RBAM_021460__ 396 CGGAGACAAAATGAAAGAAATCCGTGTAGAAGGATAA 432
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