Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03467 and RBAM_021440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_03467___sipS.1.9828.seq
# -bsequence pep-align/RBAM_021440___sipS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03467___sipS-RBAM_021440___sipS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03467___sipS-RBAM_021440___sipS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03467___sipS
# 2: RBAM_021440___sipS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 151/186 (81.2%)
# Similarity: 168/186 (90.3%)
# Gaps: 3/186 ( 1.6%)
# Score: 789.5
#
#
#=======================================
BSNT_03467___ 1 MKS--ENVSKKKSILEWVKAIVIAVVLALLIRNFIFAPYVVDGESMEPTL 48
||| |..|||.::|:|.|||:||||||||||||:||||:|||.||:|||
RBAM_021440__ 1 MKSEKEKTSKKSAVLDWAKAIIIAVVLALLIRNFLFAPYLVDGRSMDPTL 50
BSNT_03467___ 49 HDRERVFVNMTVKYIGEFDRGDIVVLNGDDVHYVKRIIGLPGDTVEMKND 98
|||||:|||||||||.:|.||.||||||::.||||||||||||||:||||
RBAM_021440__ 51 HDRERIFVNMTVKYISDFKRGQIVVLNGENEHYVKRIIGLPGDTVQMKND 100
BSNT_03467___ 99 QLYINGKKVDEPYLAANKKRAKQDG-KPLTDDFGPVKVPDNKYFVMGDNR 147
|||||||||.||||||||.:||||| ..||:|||||||||:|||||||||
RBAM_021440__ 101 QLYINGKKVSEPYLAANKHKAKQDGYDRLTEDFGPVKVPDDKYFVMGDNR 150
BSNT_03467___ 148 RNSMDSRNGLGLFTKKQIAGTSKFVFYPFNEMRKTN 183
|.||||||||||||||||||||||||:||||:|||.
RBAM_021440__ 151 RESMDSRNGLGLFTKKQIAGTSKFVFFPFNEIRKTK 186
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