Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03466 and RBAM_021430

See DNA alignment / Visit BSNT_03466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03466___ypuD.1.9828.seq
#    -bsequence pep-align/RBAM_021430___ypuD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03466___ypuD-RBAM_021430___ypuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03466___ypuD-RBAM_021430___ypuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03466___ypuD
# 2: RBAM_021430___ypuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      93/114 (81.6%)
# Similarity:   104/114 (91.2%)
# Gaps:           0/114 ( 0.0%)
# Score: 487.0
# 
#
#=======================================

BSNT_03466___      1 MGRIKTKITILLVLLLLLAGGYMYINDVELKDVPTAIGQTLSSEEEEYTI     50
                     |||||||..||||||||||||||.|||:||||||||||||||.|:||||:
RBAM_021430__      1 MGRIKTKAAILLVLLLLLAGGYMVINDIELKDVPTAIGQTLSQEKEEYTV     50

BSNT_03466___     51 QEYKVTKIDGSEYHGVAENGTKIIFNGKKLNQDLSDIKEGDKIKAYFSKS    100
                     :.||:|||:|:||||.|||||||||||.||.|||||:|:|||||||||||
RBAM_021430__     51 KTYKITKIEGTEYHGTAENGTKIIFNGDKLKQDLSDVKKGDKIKAYFSKS    100

BSNT_03466___    101 KRIDGLIKVAKVND    114
                     .|||||:||.|||:
RBAM_021430__    101 NRIDGLLKVVKVNE    114


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