Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03464 and RBAM_021420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_03464___ribD.1.9828.seq
# -bsequence pep-align/RBAM_021420___ribD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03464___ribD-RBAM_021420___ribD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03464___ribD-RBAM_021420___ribD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03464___ribD
# 2: RBAM_021420___ribD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 285/372 (76.6%)
# Similarity: 318/372 (85.5%)
# Gaps: 12/372 ( 3.2%)
# Score: 1485.0
#
#
#=======================================
BSNT_03464___ 1 MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHA 50
||||||..|::||::|||||:|||||||||||:||||||||||:||||||
RBAM_021420__ 1 MEEYYMNTAIELARRGEGQTQSNPLVGAVVVKNGQIVGMGAHLQYGEAHA 50
BSNT_03464___ 51 EVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMR 100
|||||||||.||:|||:|||||||||||||||||||||.|||||||:|::
RBAM_021420__ 51 EVHAIHMAGRHAKGADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVK 100
BSNT_03464___ 101 DPNPLVAGRGISMIKEAGIEVREGILADQAESLNEKFLHFMRTGLPYVTL 150
||||||||:||.|::.|||||:.|:|..|||.||:.||||||||||||||
RBAM_021420__ 101 DPNPLVAGKGIGMLEAAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTL 150
BSNT_03464___ 151 KAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADN 200
|||||||||.||.|||||||||||||.|||||||:|||||||.|||||||
RBAM_021420__ 151 KAAASLDGKTATETGDSKWITSEAARLDAQQYRKSHQSILVGAGTVKADN 200
BSNT_03464___ 201 PSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEE 250
||||||||:..||||||||||.|:|||.|.|:.|..|||||||...||.:
RBAM_021420__ 201 PSLTCRLPDAVKQPVRVILDTKLTIPETANVLTDGAAPTWIFTAKGADVQ 250
BSNT_03464___ 251 KKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFV 300
||.||:|.|:.:..|||:||.:|:||.||||.||||||||||::||||||
RBAM_021420__ 251 KKDRLTALGIKVIPLETDRIHVPEVLSILAENGIMSVYVEGGASVHGSFV 300
BSNT_03464___ 301 KEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGR 350
||.||||:.|||||||||||.|||||||||||||||||.||||.|||||.
RBAM_021420__ 301 KEDCFQELHFYFAPKLIGGTLAPSLISGEGFQSMKDVPHLQFTQITQIGP 350
BSNT_03464___ 351 DIKLTAKPTKE----------- 361
||||||.| |:
RBAM_021420__ 351 DIKLTAIP-KDGKDGDDVYRNR 371
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