Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03464 and RBAM_021420

See DNA alignment / Visit BSNT_03464 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03464___ribD.1.9828.seq
#    -bsequence pep-align/RBAM_021420___ribD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03464___ribD-RBAM_021420___ribD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03464___ribD-RBAM_021420___ribD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03464___ribD
# 2: RBAM_021420___ribD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity:     285/372 (76.6%)
# Similarity:   318/372 (85.5%)
# Gaps:          12/372 ( 3.2%)
# Score: 1485.0
# 
#
#=======================================

BSNT_03464___      1 MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHA     50
                     ||||||..|::||::|||||:|||||||||||:||||||||||:||||||
RBAM_021420__      1 MEEYYMNTAIELARRGEGQTQSNPLVGAVVVKNGQIVGMGAHLQYGEAHA     50

BSNT_03464___     51 EVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMR    100
                     |||||||||.||:|||:|||||||||||||||||||||.|||||||:|::
RBAM_021420__     51 EVHAIHMAGRHAKGADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVK    100

BSNT_03464___    101 DPNPLVAGRGISMIKEAGIEVREGILADQAESLNEKFLHFMRTGLPYVTL    150
                     ||||||||:||.|::.|||||:.|:|..|||.||:.||||||||||||||
RBAM_021420__    101 DPNPLVAGKGIGMLEAAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTL    150

BSNT_03464___    151 KAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADN    200
                     |||||||||.||.|||||||||||||.|||||||:|||||||.|||||||
RBAM_021420__    151 KAAASLDGKTATETGDSKWITSEAARLDAQQYRKSHQSILVGAGTVKADN    200

BSNT_03464___    201 PSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEE    250
                     ||||||||:..||||||||||.|:|||.|.|:.|..|||||||...||.:
RBAM_021420__    201 PSLTCRLPDAVKQPVRVILDTKLTIPETANVLTDGAAPTWIFTAKGADVQ    250

BSNT_03464___    251 KKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFV    300
                     ||.||:|.|:.:..|||:||.:|:||.||||.||||||||||::||||||
RBAM_021420__    251 KKDRLTALGIKVIPLETDRIHVPEVLSILAENGIMSVYVEGGASVHGSFV    300

BSNT_03464___    301 KEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGR    350
                     ||.||||:.|||||||||||.|||||||||||||||||.||||.|||||.
RBAM_021420__    301 KEDCFQELHFYFAPKLIGGTLAPSLISGEGFQSMKDVPHLQFTQITQIGP    350

BSNT_03464___    351 DIKLTAKPTKE-----------    361
                     ||||||.| |:           
RBAM_021420__    351 DIKLTAIP-KDGKDGDDVYRNR    371


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