Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03460 and RBAM_021390

See DNA alignment / Visit BSNT_03460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_03460___ribH.1.9828.seq
#    -bsequence pep-align/RBAM_021390___ribH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03460___ribH-RBAM_021390___ribH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03460___ribH-RBAM_021390___ribH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03460___ribH
# 2: RBAM_021390___ribH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     144/154 (93.5%)
# Similarity:   148/154 (96.1%)
# Gaps:           0/154 ( 0.0%)
# Score: 739.0
# 
#
#=======================================

BSNT_03460___      1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDV     50
                     |||||||||||||||||||||||:||||||||||||.||||||::|||||
RBAM_021390__      1 MNIIQGNLVGTGLKIGIVVGRFNEFITSKLLSGAEDTLLRHGVESNDIDV     50

BSNT_03460___     51 AWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGI    100
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_021390__     51 AWVPGAFEIPFAAKKMAETKKYDAVITLGTVIRGATTHYDYVCNEAAKGI    100

BSNT_03460___    101 AQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLN    150
                     |||...|||||||||||||.||||||||||||||||.|||||||||||||
RBAM_021390__    101 AQAGTATGVPVIFGIVTTETIEQAIERAGTKAGNKGADCAVSAIEMANLN    150

BSNT_03460___    151 RSFE    154
                     ||||
RBAM_021390__    151 RSFE    154


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