Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03460 and RBAM_021390

See Amino acid alignment / Visit BSNT_03460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_03460___ribH.1.9828.seq
#    -bsequence dna-align/RBAM_021390___ribH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03460___ribH-RBAM_021390___ribH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03460___ribH-RBAM_021390___ribH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03460___ribH
# 2: RBAM_021390___ribH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     377/465 (81.1%)
# Similarity:   377/465 (81.1%)
# Gaps:           0/465 ( 0.0%)
# Score: 1533.0
# 
#
#=======================================

BSNT_03460___      1 ATGAATATCATACAAGGAAATTTAGTTGGTACAGGTCTTAAAATCGGAAT     50
                     ||||||||||||||||||||..||||.||.|||||.||||||||||||||
RBAM_021390__      1 ATGAATATCATACAAGGAAACCTAGTAGGAACAGGACTTAAAATCGGAAT     50

BSNT_03460___     51 CGTAGTAGGAAGATTTAATGATTTTATTACGAGCAAGCTGCTGAGCGGAG    100
                     |||.||.||.|||||||||||.|||||.||||||||||||.|.|||||||
RBAM_021390__     51 CGTCGTCGGCAGATTTAATGAATTTATAACGAGCAAGCTGTTAAGCGGAG    100

BSNT_03460___    101 CAGAAGATGCGCTGCTCAGACATGGCGTAGACACAAATGACATTGATGTG    150
                     |.|||||..||.||||..|.||.||.|||||..||||.||||||||.||.
RBAM_021390__    101 CGGAAGACACGTTGCTTCGCCACGGTGTAGAATCAAACGACATTGACGTC    150

BSNT_03460___    151 GCTTGGGTTCCAGGCGCATTTGAAATACCGTTTGCTGCGAAAAAAATGGC    200
                     ||||||||.||.||.||.||||||||.||||||||.||.||.||||||||
RBAM_021390__    151 GCTTGGGTGCCGGGAGCGTTTGAAATCCCGTTTGCGGCAAAGAAAATGGC    200

BSNT_03460___    201 GGAAACAAAAAAATATGATGCTATTATCACATTGGGCACTGTCATCAGAG    250
                     ||||||.||||||||.|||||..|.||.||..|.|||||.||.|||||||
RBAM_021390__    201 GGAAACGAAAAAATACGATGCCGTCATTACGCTCGGCACGGTTATCAGAG    250

BSNT_03460___    251 GCGCAACGACACATTACGATTATGTCTGCAATGAAGCTGCAAAAGGCATC    300
                     |.||.||.||.|||||.||.|||||||||||||||||.||||||||||||
RBAM_021390__    251 GAGCGACAACGCATTATGACTATGTCTGCAATGAAGCGGCAAAAGGCATC    300

BSNT_03460___    301 GCGCAAGCAGCAAACACTACTGGTGTACCTGTCATCTTTGGAATTGTAAC    350
                     ||.||.||.|.||...|.||.||.||.||.||.|||||.||.||.||.||
RBAM_021390__    301 GCCCAGGCGGGAACGGCGACGGGCGTCCCGGTTATCTTCGGCATCGTGAC    350

BSNT_03460___    351 AACTGAAAACATCGAACAGGCTATCGAGCGTGCCGGCACAAAAGCGGGCA    400
                     .|||||||.|||.||.|||||.|||||.||.|||||.||||||||.||.|
RBAM_021390__    351 GACTGAAACCATTGAGCAGGCCATCGAACGAGCCGGAACAAAAGCCGGAA    400

BSNT_03460___    401 ATAAAGGTGTAGATTGTGCTGTTTCTGCCATTGAAATGGCAAATTTAAAC    450
                     ||||.||.|..|||||.||.||.|||||||||||.|||||||||||||||
RBAM_021390__    401 ATAAGGGAGCGGATTGCGCAGTATCTGCCATTGAGATGGCAAATTTAAAC    450

BSNT_03460___    451 CGCTCATTTGAATAA    465
                     ||.||||||||||||
RBAM_021390__    451 CGTTCATTTGAATAA    465


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