Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03458 and RBAM_021380

See DNA alignment / Visit BSNT_03458 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_03458___ribT.1.9828.seq
#    -bsequence pep-align/RBAM_021380___ribTD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03458___ribT-RBAM_021380___ribTD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03458___ribT-RBAM_021380___ribTD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03458___ribT
# 2: RBAM_021380___ribTD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:     118/124 (95.2%)
# Similarity:   120/124 (96.8%)
# Gaps:           0/124 ( 0.0%)
# Score: 611.0
# 
#
#=======================================

BSNT_03458___      1 MLIRYKKSFEKIAMGLLSFMPNEKDLKQLQQTIKDYETDTDRQLFLWKED     50
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_021380__      1 MLIRYKKSFEKIAMGLLSFMPNEKDLKQLQQTIKDYETDTGRQLFLWKED     50

BSNT_03458___     51 EDIVGAIGVEKKDSEVEIRHISVNPSHRHQGIGKQMMDALKHLFKTQVLV    100
                     |||||||||||||||||||||||||||||||||||||||||.||||:.||
RBAM_021380__     51 EDIVGAIGVEKKDSEVEIRHISVNPSHRHQGIGKQMMDALKRLFKTEALV    100

BSNT_03458___    101 PNELTQSFFERCQGQQDQDISYNN    124
                     |||||||||||||.|:||||||||
RBAM_021380__    101 PNELTQSFFERCQHQKDQDISYNN    124


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