Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03458 and RBAM_021380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03458___ribT.1.9828.seq
# -bsequence dna-align/RBAM_021380___ribTD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03458___ribT-RBAM_021380___ribTD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03458___ribT-RBAM_021380___ribTD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03458___ribT
# 2: RBAM_021380___ribTD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 330/375 (88.0%)
# Similarity: 330/375 (88.0%)
# Gaps: 0/375 ( 0.0%)
# Score: 1470.0
#
#
#=======================================
BSNT_03458___ 1 ATGTTAATTCGTTATAAAAAATCGTTTGAAAAGATTGCGATGGGGCTTCT 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_021380__ 1 ATGTTAATTCGTTATAAAAAATCGTTTGAAAAGATTGCGATGGGTCTTCT 50
BSNT_03458___ 51 TTCGTTTATGCCGAATGAAAAAGACCTTAAGCAGCTTCAGCAGACAATTA 100
.||.||||||||||||||||||||.||.||||||||||||||||||||.|
RBAM_021380__ 51 GTCATTTATGCCGAATGAAAAAGATCTCAAGCAGCTTCAGCAGACAATAA 100
BSNT_03458___ 101 AGGACTACGAAACGGATACAGACCGCCAGCTCTTTCTTTGGAAAGAGGAC 150
|||||||.|||||||||||.|.|||||||||||||||||||||||||||.
RBAM_021380__ 101 AGGACTATGAAACGGATACTGGCCGCCAGCTCTTTCTTTGGAAAGAGGAT 150
BSNT_03458___ 151 GAGGATATCGTCGGAGCAATCGGAGTCGAAAAAAAGGATTCTGAGGTTGA 200
||.||||||||||||||.||||||||||||||||||||.||.||.|||||
RBAM_021380__ 151 GAAGATATCGTCGGAGCGATCGGAGTCGAAAAAAAGGACTCAGAAGTTGA 200
BSNT_03458___ 201 GATCCGGCATATCAGTGTGAATCCTTCTCATCGCCATCAAGGAATCGGAA 250
.||||||||||||||.||||||||||||||.|||||||||||||||||||
RBAM_021380__ 201 AATCCGGCATATCAGCGTGAATCCTTCTCACCGCCATCAAGGAATCGGAA 250
BSNT_03458___ 251 AACAGATGATGGATGCTTTAAAGCATTTATTCAAAACGCAAGTACTGGTT 300
|.||.||||||||.||.|||||.|.|.|.|||||||||.|.|.|||.|||
RBAM_021380__ 251 AGCAAATGATGGACGCCTTAAAACGTCTGTTCAAAACGGAGGCACTCGTT 300
BSNT_03458___ 301 CCAAATGAATTAACGCAGAGCTTTTTCGAACGTTGTCAAGGTCAGCAGGA 350
||.||||||||||||||.||||||||.|||||.||||||..|||..|.||
RBAM_021380__ 301 CCGAATGAATTAACGCAAAGCTTTTTTGAACGCTGTCAACATCAAAAAGA 350
BSNT_03458___ 351 TCAAGACATTTCATACAATAATTAA 375
|||.||.||.|||||.|||||.|.|
RBAM_021380__ 351 TCAGGATATCTCATATAATAACTGA 375
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