Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03455 and RBAM_021350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_03455___ypuH.1.9828.seq
# -bsequence pep-align/RBAM_021350___scpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03455___ypuH-RBAM_021350___scpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03455___ypuH-RBAM_021350___scpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03455___ypuH
# 2: RBAM_021350___scpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 178/197 (90.4%)
# Similarity: 186/197 (94.4%)
# Gaps: 0/197 ( 0.0%)
# Score: 896.0
#
#
#=======================================
BSNT_03455___ 1 MGLDIVNWKAIVEALLYAAGDEGLTKKQLLTVLEIEEPELNTIMADVADE 50
|.|||||||||||||||||||||||||||:|||||||.||..||.:||.:
RBAM_021350__ 1 MALDIVNWKAIVEALLYAAGDEGLTKKQLVTVLEIEEAELAGIMEEVAAQ 50
BSNT_03455___ 51 YREDTRGIELIEYADTYMLSTKKDFAPYLKKLIEVPSKGLSQASLEVLAI 100
|:||.|||||.||||||||.|||:|.||||||||||||||||||||||||
RBAM_021350__ 51 YKEDDRGIELTEYADTYMLGTKKEFVPYLKKLIEVPSKGLSQASLEVLAI 100
BSNT_03455___ 101 VSYKQPITRAEIEEIRGVKSERILHSLVAKALLCEVGRADGPGRAILYGT 150
|||||||||||||:||||||||||||||:|||||||||||||||||||||
RBAM_021350__ 101 VSYKQPITRAEIEDIRGVKSERILHSLVSKALLCEVGRADGPGRAILYGT 150
BSNT_03455___ 151 TPTFLEQFGLKTLDELPPLPENAEEDVLQEEADLFFENFNQTFEDIK 197
||.||||||||||:|||||||||||||||||||||||||||||||||
RBAM_021350__ 151 TPVFLEQFGLKTLEELPPLPENAEEDVLQEEADLFFENFNQTFEDIK 197
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