Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03455 and RBAM_021350

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_03455___ypuH.1.9828.seq
#    -bsequence pep-align/RBAM_021350___scpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03455___ypuH-RBAM_021350___scpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03455___ypuH-RBAM_021350___scpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03455___ypuH
# 2: RBAM_021350___scpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity:     178/197 (90.4%)
# Similarity:   186/197 (94.4%)
# Gaps:           0/197 ( 0.0%)
# Score: 896.0
# 
#
#=======================================

BSNT_03455___      1 MGLDIVNWKAIVEALLYAAGDEGLTKKQLLTVLEIEEPELNTIMADVADE     50
                     |.|||||||||||||||||||||||||||:|||||||.||..||.:||.:
RBAM_021350__      1 MALDIVNWKAIVEALLYAAGDEGLTKKQLVTVLEIEEAELAGIMEEVAAQ     50

BSNT_03455___     51 YREDTRGIELIEYADTYMLSTKKDFAPYLKKLIEVPSKGLSQASLEVLAI    100
                     |:||.|||||.||||||||.|||:|.||||||||||||||||||||||||
RBAM_021350__     51 YKEDDRGIELTEYADTYMLGTKKEFVPYLKKLIEVPSKGLSQASLEVLAI    100

BSNT_03455___    101 VSYKQPITRAEIEEIRGVKSERILHSLVAKALLCEVGRADGPGRAILYGT    150
                     |||||||||||||:||||||||||||||:|||||||||||||||||||||
RBAM_021350__    101 VSYKQPITRAEIEDIRGVKSERILHSLVSKALLCEVGRADGPGRAILYGT    150

BSNT_03455___    151 TPTFLEQFGLKTLDELPPLPENAEEDVLQEEADLFFENFNQTFEDIK    197
                     ||.||||||||||:|||||||||||||||||||||||||||||||||
RBAM_021350__    151 TPVFLEQFGLKTLEELPPLPENAEEDVLQEEADLFFENFNQTFEDIK    197


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