Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03453 and RBAM_021340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_03453___ypuI.1.9828.seq
# -bsequence pep-align/RBAM_021340___ypuI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03453___ypuI-RBAM_021340___ypuI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03453___ypuI-RBAM_021340___ypuI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03453___ypuI
# 2: RBAM_021340___ypuI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 120/182 (65.9%)
# Similarity: 137/182 (75.3%)
# Gaps: 9/182 ( 4.9%)
# Score: 598.5
#
#
#=======================================
BSNT_03453___ 1 ---MKEAKCERQRHEGKIPNEMGHSIVRAQTQKTGEFLSMVVNTVNDYLN 47
|...|..|:| .|||:|||||.|::|||||:.||..|:.|||
RBAM_021340__ 1 MTQMTTYKRGRKR------TEMGNSIVRAHTEETGEFLAEVVTMVSSYLN 44
BSNT_03453___ 48 QTTLESLQAELPIEKGYCCDVLSTLRRMAVFCEGGAEACRRLLMQEPFQE 97
.|||..::|:...::.||.||||.||||.|||||..||||||||||||.|
RBAM_021340__ 45 HTTLPEMRAQGEADEAYCRDVLSVLRRMTVFCEGAQEACRRLLMQEPFHE 94
BSNT_03453___ 98 ARAEKTLYNVYHQCIEEFFMPKKDTWCENSRASYTGVSAIEFYHAVPASL 147
||||||||.|||||:|||||||||||.|||||:|||.||||||..||.||
RBAM_021340__ 95 ARAEKTLYKVYHQCVEEFFMPKKDTWYENSRAAYTGQSAIEFYQQVPDSL 144
BSNT_03453___ 148 EQLLLPLSAAFLKMREELAHYEASGSSMAPIR 179
..|||.||:.||:||||||.||||||:||.:|
RBAM_021340__ 145 RSLLLSLSSEFLRMREELAQYEASGSNMASVR 176
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