Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03448 and RBAM_021300

See DNA alignment / Visit BSNT_03448 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_03448___rluB.1.9828.seq
#    -bsequence pep-align/RBAM_021300___rluB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03448___rluB-RBAM_021300___rluB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03448___rluB-RBAM_021300___rluB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03448___rluB
# 2: RBAM_021300___rluB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     230/244 (94.3%)
# Similarity:   240/244 (98.4%)
# Gaps:           0/244 ( 0.0%)
# Score: 1177.0
# 
#
#=======================================

BSNT_03448___      1 MERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEV     50
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
RBAM_021300__      1 MERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVITELGVKVTGSDQIEV     50

BSNT_03448___     51 NGLKVEREEPVYFLLYKPRGVISAAQDDKGRKVVTDFFKNIPQRIYPIGR    100
                     |||||||||||||||||||||||||.|||||||||||||.:|||||||||
RBAM_021300__     51 NGLKVEREEPVYFLLYKPRGVISAADDDKGRKVVTDFFKEVPQRIYPIGR    100

BSNT_03448___    101 LDYDTSGLLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLER    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_021300__    101 LDYDTSGLLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPSKELLRKLER    150

BSNT_03448___    151 GIRLEEGKTAPAKAKLLSLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHE    200
                     ||:|||||||||:||||||||:|||||||||||||||||||||||||||:
RBAM_021300__    151 GIQLEEGKTAPARAKLLSLDKRKQTSIIQLTIHEGRNRQVRRMFEAIGHD    200

BSNT_03448___    201 VIKLKREEYAFLNLRGLHTGDARELTPHEVKRLRALADHGKNAF    244
                     |:||||||||||:||||.|||||||:|||||||||||:||||||
RBAM_021300__    201 VLKLKREEYAFLDLRGLRTGDARELSPHEVKRLRALAEHGKNAF    244


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