Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03448 and RBAM_021300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03448___rluB.1.9828.seq
# -bsequence dna-align/RBAM_021300___rluB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03448___rluB-RBAM_021300___rluB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03448___rluB-RBAM_021300___rluB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03448___rluB
# 2: RBAM_021300___rluB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 736
# Identity: 593/736 (80.6%)
# Similarity: 593/736 (80.6%)
# Gaps: 2/736 ( 0.3%)
# Score: 2381.0
#
#
#=======================================
BSNT_03448___ 1 ATGGAAAGACTGCAAAAAGTGATTGCTCATGCCGGAGTTGCGTCGCGCAG 50
||||||||||||||||||||.||||||||||||||.||.||.||.|||||
RBAM_021300__ 1 ATGGAAAGACTGCAAAAAGTTATTGCTCATGCCGGCGTGGCATCACGCAG 50
BSNT_03448___ 51 AAAGGCAGAAGAGCTGATTAAAGAAGGAAAAGTAAAGGTGAATGGCAAAG 100
||||||.|||||||||||.||||||||||||||||||||||||||.||||
RBAM_021300__ 51 AAAGGCGGAAGAGCTGATAAAAGAAGGAAAAGTAAAGGTGAATGGAAAAG 100
BSNT_03448___ 101 TAGTAACAGAGCTAGGTGTTAAGGTCACCGGTTCTGATCAGATTGAGGTA 150
||.||||||||||.||.||.||.||.||||||||||||||||||||.|||
RBAM_021300__ 101 TAATAACAGAGCTCGGCGTAAAAGTGACCGGTTCTGATCAGATTGAAGTA 150
BSNT_03448___ 151 AACGGGTTAAAGGTTGAACGCGAAGAGCCGGTTTACTTTCT-CTTATATA 199
|||||.||||||||.||.||.|||||.||.||.|||||||| ||| ||||
RBAM_021300__ 151 AACGGATTAAAGGTGGAGCGGGAAGAACCCGTGTACTTTCTGCTT-TATA 199
BSNT_03448___ 200 AACCAAGAGGCGTTATTTCCGCAGCGCAAGATGATAAAGGACGCAAAGTG 249
||||.|||||.||.||.||.|||||..|.||.||.|||||.||.||||||
RBAM_021300__ 200 AACCGAGAGGAGTGATCTCAGCAGCTGATGACGACAAAGGGCGGAAAGTG 249
BSNT_03448___ 250 GTGACGGACTTTTTTAAAAATATTCCGCAGCGCATTTATCCGATTGGGCG 299
|||||.||||||||.|||.|..|.||||||||||||||||||||.||..|
RBAM_021300__ 250 GTGACCGACTTTTTCAAAGAAGTGCCGCAGCGCATTTATCCGATCGGCAG 299
BSNT_03448___ 300 TCTGGACTATGATACGAGCGGTCTTTTGCTTTTAACCAATGACGGCGAAT 349
.||.||.||||||||||||||.|||||..|..|.||.|||||||||||.|
RBAM_021300__ 300 GCTTGATTATGATACGAGCGGACTTTTATTGCTGACAAATGACGGCGAGT 349
BSNT_03448___ 350 TCGCCAATAAGCTGATGCACCCTAAGTATGAAATAGACAAAACATACGTG 399
|.|||||.||.||.|||||.||.||.||.|||||.||.||.||.|||||.
RBAM_021300__ 350 TTGCCAACAAACTCATGCATCCGAAATACGAAATTGATAAGACGTACGTC 399
BSNT_03448___ 400 GCGAAGGTGAAAGGAATCCCGCCTAAAGAGCTGCTCAGAAAGCTGGAGCG 449
||.||.|||||.||.||.||..|.||.||.||.||.||||||||.|||||
RBAM_021300__ 400 GCCAAAGTGAAGGGGATTCCTTCCAAGGAACTTCTGAGAAAGCTTGAGCG 449
BSNT_03448___ 450 CGGAATTAGGCTGGAAGAAGGCAAAACAGCGCCTGCTAAAGCGAAGCTGC 499
|||.|||..|||.|||||||||||.||.|||||.||.|.||||||..|||
RBAM_021300__ 450 CGGCATTCAGCTTGAAGAAGGCAAGACGGCGCCGGCCAGAGCGAAATTGC 499
BSNT_03448___ 500 TGTCCTTGGATAAGAAAAAGCAGACAAGCATTATTCAGCTGACGATCCAT 549
|.|||.||||.||.|.|||||||||.|||||.||||||||||||||.|||
RBAM_021300__ 500 TTTCCCTGGACAAAAGAAAGCAGACGAGCATCATTCAGCTGACGATTCAT 549
BSNT_03448___ 550 GAGGGACGCAACAGACAGGTGCGCCGCATGTTTGAAGCGATCGGACATGA 599
||.||.||.|||||||||||.|||||||||||.||.||||||||.|||||
RBAM_021300__ 550 GAAGGCCGAAACAGACAGGTCCGCCGCATGTTCGAGGCGATCGGTCATGA 599
BSNT_03448___ 600 GGTAATCAAGCTGAAGCGTGAGGAATACGCGTTTTTAAACCTGCGAGGCC 649
.||..|.||.||.||.|||||.||||||||.||||||.|..|..||||||
RBAM_021300__ 600 CGTGCTGAAACTAAAACGTGAAGAATACGCATTTTTAGATTTAAGAGGCC 649
BSNT_03448___ 650 TGCACACGGGCGATGCCAGAGAGCTTACGCCTCACGAAGTAAAAAGGCTC 699
|||.|||.||.||.||.|||||..|..||||.||.||.||.||||||||.
RBAM_021300__ 650 TGCGCACAGGAGACGCAAGAGAATTGTCGCCGCATGAGGTGAAAAGGCTG 699
BSNT_03448___ 700 AGAGCACTGGCGGATCACGGTAAAAACGCTTTCTAA 735
.|.||..|.||.||.|||||||||||||||||||||
RBAM_021300__ 700 CGGGCTTTAGCTGAACACGGTAAAAACGCTTTCTAA 735
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