Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03440 and RBAM_021260

See DNA alignment / Visit BSNT_03440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence pep-align/BSNT_03440___resD.1.9828.seq
#    -bsequence pep-align/RBAM_021260___resD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03440___resD-RBAM_021260___resD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03440___resD-RBAM_021260___resD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03440___resD
# 2: RBAM_021260___resD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     228/251 (90.8%)
# Similarity:   233/251 (92.8%)
# Gaps:          11/251 ( 4.4%)
# Score: 1172.0
# 
#
#=======================================

BSNT_03440___      1 MKVTEGKQGENMDQTNETKILVVDDEARIRRLLRMYLERENYAIDEAENG     50
                                |||||||||||||||||||||||||||||||.|:|||||
RBAM_021260__      1 -----------MDQTNETKILVVDDEARIRRLLRMYLERENYVIEEAENG     39

BSNT_03440___     51 DEAIAKGLEANYDLILLDLMMPGTDGIEVCRQIREKKATPIIMLTAKGEE    100
                     ||||..||.::|||:|||||||||||||||||:|||||||||||||||||
RBAM_021260__     40 DEAIKMGLASDYDLVLLDLMMPGTDGIEVCRQLREKKATPIIMLTAKGEE     89

BSNT_03440___    101 ANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRASQTSYFNANTPTKNV    150
                     ||||||||||||||||||||||||||||||||||||||||..||||||||
RBAM_021260__     90 ANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRASQTSYLTANTPTKNV    139

BSNT_03440___    151 LVFSHLSIDHDAHRVTADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLK    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021260__    140 LVFSHLSIDHDAHRVTADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLK    189

BSNT_03440___    201 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWGVGYKFEVGA    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_021260__    190 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPGAAKKIVTVWGVGYKFEVGA    239

BSNT_03440___    251 E    251
                     |
RBAM_021260__    240 E    240


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