Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03439 and RBAM_021250

See DNA alignment / Visit BSNT_03439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence pep-align/BSNT_03439___resE.1.9828.seq
#    -bsequence pep-align/RBAM_021250___resE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03439___resE-RBAM_021250___resE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03439___resE-RBAM_021250___resE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03439___resE
# 2: RBAM_021250___resE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity:     533/593 (89.9%)
# Similarity:   559/593 (94.3%)
# Gaps:           4/593 ( 0.7%)
# Score: 2708.0
# 
#
#=======================================

BSNT_03439___      1 MKFWKSVVGKLWFTILSLVLIVLFILTVLLLEFIENYHVEEAENDLTQLA     50
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_021250__      1 MKFWKSVVGKLWFTILSLVLIVLFILTVLLLEFIENYHVEEAEKDLTQLA     50

BSNT_03439___     51 NKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNDKNRLS    100
                     :|:|||:||||||.|||||||||||||||||||||:|:.||||||.|.||
RBAM_021250__     51 DKIAVIIENHEDQPLARSITWELADNLTSIAIIQDDKHVWYSPNDDNHLS    100

BSNT_03439___    101 SITVEQIQHDKDLNKALQDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGK    150
                     |||:|||:||:||:|||.|.||||||...::..:||||||||||||||||
RBAM_021250__    101 SITLEQIKHDRDLHKALTDRKKVSKRAVPNNAGSDNERLIVGVPYEKDGK    150

BSNT_03439___    151 KGMVFLSQSLLAVKDTTKHTTRYIFLAAGIAIVLTTFFAFFLSSRVTYPL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021250__    151 KGMVFLSQSLLAVKDTTKHTTRYIFLAAGIAIVLTTFFAFFLSSRVTYPL    200

BSNT_03439___    201 RKMREGAQDLAKGKFDTKIPILTQDEIGELATAFNQMGRQLNFHINALNQ    250
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_021250__    201 RKMREGAQDLAKGKFDTKIPILTQDEIGELAIAFNQMGRQLNFHINALNQ    250

BSNT_03439___    251 EKEQLSNILSSMADGVITINIDGTILVTNPPAERFLQAWYYEQNMNIKEG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021250__    251 EKEQLSNILSSMADGVITINIDGTILVTNPPAERFLQAWYYEQNMNIKEG    300

BSNT_03439___    301 DNLPPEAKELFQNAVSTEKEQMIEMTLQGRSWVLLMSPLYAESHVRGAVA    350
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_021250__    301 DNLPPEAKELFQNAVNTEKEQMIEMTLQGRSWVLLMSPLYAESHVRGAVA    350

BSNT_03439___    351 VLRDMTEERRLDKLREDFIANVSHELRTPISMLQGYSEAIVDDIASSEED    400
                     ||||||||||||||||||||||||||||||||||||||||||||||:||:
RBAM_021250__    351 VLRDMTEERRLDKLREDFIANVSHELRTPISMLQGYSEAIVDDIASTEEE    400

BSNT_03439___    401 RKEIAQIIYDESLRMGRLVNDLLDLARMESGHTGLHYEKINVNEFLEKII    450
                     :|||||||||||||||||||||||||||||||||||||.:|::||||||.
RBAM_021250__    401 KKEIAQIIYDESLRMGRLVNDLLDLARMESGHTGLHYETVNLHEFLEKIS    450

BSNT_03439___    451 RKFSGVAKEKNIALQNDISLTEEEFMLDEDKMEQVFTNLIDNALRHTSSG    500
                     ||||||||||.::|..|||:::.|.:.||||||||||||||||||||.||
RBAM_021250__    451 RKFSGVAKEKGVSLTEDISVSQPECVFDEDKMEQVFTNLIDNALRHTESG    500

BSNT_03439___    501 GSVSISVHSVKDGLKIDIKDSGSGIPEEDLPFIFERFYKADKARTRGRAG    550
                     |||.|:...|||||||||||||||||||||||||||||||||||||||||
RBAM_021250__    501 GSVHIAAQIVKDGLKIDIKDSGSGIPEEDLPFIFERFYKADKARTRGRAG    550

BSNT_03439___    551 TGLGLAIVKNIVEAHNGSITVHSRIDKGTTFTFYIPTKR----    589
                     |||||||||||||||.|||.|||.||||||||||||||.    
RBAM_021250__    551 TGLGLAIVKNIVEAHGGSIAVHSSIDKGTTFTFYIPTKAQDDV    593


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