Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03439 and RBAM_021250
See
Amino acid alignment /
Visit
BSNT_03439 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03439___resE.1.9828.seq
# -bsequence dna-align/RBAM_021250___resE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03439___resE-RBAM_021250___resE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03439___resE-RBAM_021250___resE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03439___resE
# 2: RBAM_021250___resE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1812
# Identity: 1400/1812 (77.3%)
# Similarity: 1400/1812 (77.3%)
# Gaps: 72/1812 ( 4.0%)
# Score: 5534.0
#
#
#=======================================
BSNT_03439___ 1 ATGAAATTTTGGAAAAGCGTAGTAGGCAAGCTGTGGTTTACGATCCTTTC 50
|||||.||||||||||||||||||||.|||||.||||||||.||.|||||
RBAM_021250__ 1 ATGAAGTTTTGGAAAAGCGTAGTAGGAAAGCTTTGGTTTACCATTCTTTC 50
BSNT_03439___ 51 ACTCGTCTTGATCGTATTGTTCATTTTAACGGTTCTTTTGCTGGAGTTTA 100
||||||.||.||.||.||.||.|||||||||||.||..|.|||||.||||
RBAM_021250__ 51 ACTCGTGTTAATTGTTTTATTTATTTTAACGGTGCTGCTTCTGGAATTTA 100
BSNT_03439___ 101 TTGAAAACTACCATGTGGAAGAAGCTGAGAATGATTTAACACAGCTTGCG 150
|.|||||.|||||.||.||||||||.||.||.||||||||.||||||||.
RBAM_021250__ 101 TAGAAAATTACCACGTTGAAGAAGCGGAAAAAGATTTAACGCAGCTTGCC 150
BSNT_03439___ 151 AATAAAGTTGCTGTCATCCTAGAAAATCACGAGGACCAGGCACTGGCAAG 200
.|.|||.||||.|||||..||||||||||.||.||||||.|.||.||.||
RBAM_021250__ 151 GACAAAATTGCGGTCATAATAGAAAATCATGAAGACCAGCCGCTTGCCAG 200
BSNT_03439___ 201 GTCAATCACTTGGGAGCTCGCTGATAACTTAACAAGCATTGCCATCATCC 250
.||.|||||.|||||.||.||.||.||.|||||.|||||.||.|||||.|
RBAM_021250__ 201 ATCCATCACGTGGGAACTGGCGGACAATTTAACGAGCATCGCGATCATTC 250
BSNT_03439___ 251 AGGATGAGAAGAACCACTGGTATTCTCCGAATGATAAAAATCGCCTGTCG 300
|||||||.|||.|...|||||||||.||.|||||..|.||||...|.||.
RBAM_021250__ 251 AGGATGATAAGCATGTCTGGTATTCGCCCAATGACGATAATCATTTATCC 300
BSNT_03439___ 301 TCTATAACGGTTGAGCAAATACAGCATGACAAAGACTTAAATAAAGCTCT 350
|||||.||..|.|||||.||..|.||||||...||..|..|.||.||.||
RBAM_021250__ 301 TCTATTACATTAGAGCAGATCAAACATGACCGGGATCTGCACAAGGCGCT 350
BSNT_03439___ 351 CCAAGACCATAAAAAAGTAAGCAAACGGACGGGACTGAGCGATACAGACA 400
...|||||..|||||||||||||||||..|||..|..|.|.||.|.|...
RBAM_021250__ 351 GACAGACCGCAAAAAAGTAAGCAAACGCGCGGTGCCCAACAATGCCGGTT 400
BSNT_03439___ 401 CGGATAATGAACGCCTGATTGTAGGTGTCCCGTATGAAAAAGACGGAAAG 450
|||||||.|||||.|||||.||.||.||.|||||||||||||||||.||.
RBAM_021250__ 401 CGGATAACGAACGGCTGATCGTCGGAGTGCCGTATGAAAAAGACGGCAAA 450
BSNT_03439___ 451 AAAGGCATGGTCTTTTTATCCCAGTCTTTGCTTGCCGTTAAAGATACAAC 500
|||||||||||||||||||||||.||..||||||||||.||||||||.||
RBAM_021250__ 451 AAAGGCATGGTCTTTTTATCCCAATCGCTGCTTGCCGTCAAAGATACGAC 500
BSNT_03439___ 501 AAAACATACGACCCGCTATATTTTTCTTGCCGCTGGAATTGCGATTGTGC 550
.|||||||||||.||.||||||||||||||.||.||.|||||.||.||..
RBAM_021250__ 501 GAAACATACGACACGGTATATTTTTCTTGCGGCGGGCATTGCCATCGTCT 550
BSNT_03439___ 551 TGACCACATTTTTCGCATTCTTTTTATCAAGCAGGGTCACGTACCCTCTC 600
||||.||.||||||||.|||||||||||.||||||||.||.||.||.||.
RBAM_021250__ 551 TGACAACGTTTTTCGCGTTCTTTTTATCCAGCAGGGTGACATATCCCCTT 600
BSNT_03439___ 601 CGAAAAATGAGAGAAGGTGCGCAGGATTTGGCGAAGGGCAAGTTCGATAC 650
|||||||||.|.|||||.||.||.||.||||||||.||.|||||.|||||
RBAM_021250__ 601 CGAAAAATGCGGGAAGGCGCCCAAGACTTGGCGAAAGGAAAGTTTGATAC 650
BSNT_03439___ 651 AAAAATCCCGATTTTAACTCAGGATGAAATCGGTGAACTGGCGACCGCTT 700
||||||.||||||.|.||.||.|||||||||||.||||||||.|..||.|
RBAM_021250__ 651 AAAAATTCCGATTCTGACCCAAGATGAAATCGGGGAACTGGCCATTGCCT 700
BSNT_03439___ 701 TTAATCAAATGGGCCGGCAGCTTAACTTTCATATCAATGCGCTCAATCAA 750
|||||||.|||||.||||||||.||.||||||||.||.|||||.|||||.
RBAM_021250__ 701 TTAATCAGATGGGACGGCAGCTCAATTTTCATATTAACGCGCTGAATCAG 750
BSNT_03439___ 751 GAAAAAGAGCAGCTTTCTAACATTTTGAGCAGTATGGCTGACGGGGTTAT 800
||||||||.|||||.||.||.|||||.|||||||||||.||||||||.||
RBAM_021250__ 751 GAAAAAGAACAGCTGTCCAATATTTTAAGCAGTATGGCAGACGGGGTCAT 800
BSNT_03439___ 801 TACCATTAATATTGACGGTACGATTCTTGTGACCAACCCGCCGGCTGAAC 850
.|||||||||||.|||||.||.|||.|.|||||||||||||||||.||||
RBAM_021250__ 801 CACCATTAATATCGACGGCACCATTTTGGTGACCAACCCGCCGGCCGAAC 850
BSNT_03439___ 851 GTTTTCTTCAGGCTTGGTATTATGAACAGAACATGAATATCAAAGAAGGC 900
|||||||.|||||.|||||||||||.|||||||||||.||.||||||||.
RBAM_021250__ 851 GTTTTCTGCAGGCATGGTATTATGAGCAGAACATGAACATTAAAGAAGGA 900
BSNT_03439___ 901 GACAACCTTCCGCCTGAAGCAAAAGAGCTGTTTCAAAACGCTGTTAGCAC 950
|||||||||||.|||||||||||||||||.||||||||.||.||.|.|||
RBAM_021250__ 901 GACAACCTTCCCCCTGAAGCAAAAGAGCTATTTCAAAATGCAGTGAACAC 950
BSNT_03439___ 951 TGAAAAAGAACAAATGATTGAGATGACGCTTCAAGGCAGATCATGGGTGC 1000
.||||||||.|||||||||||.||||||||||||||.||.||||||||..
RBAM_021250__ 951 GGAAAAAGAGCAAATGATTGAAATGACGCTTCAAGGAAGGTCATGGGTTT 1000
BSNT_03439___ 1001 TTTTGATGTCGCCGCTTTATGCGGAATCGCACGTCAGAGGAGCGGTTGCC 1050
|.|||||||||||.||||||||||||||.||||||.|.||.||.||.|||
RBAM_021250__ 1001 TATTGATGTCGCCTCTTTATGCGGAATCACACGTCCGCGGCGCCGTGGCC 1050
BSNT_03439___ 1051 GTACTGCGTGACATGACAGAAGAACGCCGCCTTGATAAGCTGCGGGAGGA 1100
||.||.|||||.|||||.|||||.|||.|.||.|||||..||||.||.||
RBAM_021250__ 1051 GTGCTCCGTGATATGACCGAAGAGCGCAGGCTGGATAAATTGCGTGAAGA 1100
BSNT_03439___ 1101 CTTTATCGCAAATGTCAGTCATGAGCTGAGAACACCGATTTCCATGCTTC 1150
|||.||.||.|||||||||||||||||.|||||.||||||||.|||||.|
RBAM_021250__ 1101 CTTCATTGCCAATGTCAGTCATGAGCTCAGAACCCCGATTTCTATGCTGC 1150
BSNT_03439___ 1151 AGGGATACAGTGAAGCAATTGTCGATGACATTGCAAGCTCTGAAGAAGAC 1200
||||||||||.||||||||.||.||.||||||||||||.|.|||||.||.
RBAM_021250__ 1151 AGGGATACAGCGAAGCAATAGTGGACGACATTGCAAGCACCGAAGAGGAG 1200
BSNT_03439___ 1201 CGGAAAGAAATTGCCCAAATCATTTATGACGAATCACTCCGAATGGGCCG 1250
...||||||||.||.||.|||||||||||.|||||.||.||.||||||||
RBAM_021250__ 1201 AAAAAAGAAATCGCACAGATCATTTATGATGAATCTCTTCGCATGGGCCG 1250
BSNT_03439___ 1251 TTTAGTTAATGATTTGCTTGATTTAGCCCGAATGGAATCAGGCCATACAG 1300
..|.||.|||||||||||.|||||.|||.||||||||||.||.|||||.|
RBAM_021250__ 1251 GCTCGTCAATGATTTGCTGGATTTGGCCAGAATGGAATCCGGACATACGG 1300
BSNT_03439___ 1301 GCTTACATTATGAAA----AAATCAATGTGAATGAGTTTTTAGAAAAGAT 1346
||.|.||.||||||| |||.| ||.||||.|||.|.||.|||||
RBAM_021250__ 1301 GCCTGCACTATGAAACGGTAAACC----TGCATGAATTTCTGGAGAAGAT 1346
BSNT_03439___ 1347 CATTCGGAAGTTTTCCGGTGTTGCGAAAGAAAAAAATATTGCTTTACAAA 1396
|...||.||.||||||||.||.|||||.||||||
RBAM_021250__ 1347 CTCCCGCAAATTTTCCGGGGTAGCGAAGGAAAAA---------------- 1380
BSNT_03439___ 1397 ATGACATTTCTCTCACAGAAGA------------------GGAATTTATG 1428
|.|.||||.||||||||.|| |||.|.|.|.
RBAM_021250__ 1381 --GGCGTTTCGCTCACAGAGGACATCTCAGTGTCTCAGCCGGAGTGTGTC 1428
BSNT_03439___ 1429 CTTGATGAAGACAAGATGGAGCAGGTATTTACCAATTTGATTGATAACGC 1478
.|||||||||||||.|||||.|||||.||||||||..|.||.|||||.||
RBAM_021250__ 1429 TTTGATGAAGACAAAATGGAACAGGTGTTTACCAACCTTATAGATAATGC 1478
BSNT_03439___ 1479 GCTGCGGCATACTTCATCCGGTGGCAGTGTCTCCAT-------TTCAG-T 1520
||||||.|||||....||.||.||.||.| |.||| .|||| |
RBAM_021250__ 1479 GCTGCGCCATACGGAGTCAGGCGGAAGCG--TTCATATCGCGGCTCAGAT 1526
BSNT_03439___ 1521 CCATTCTGTGAAGGATGGATTGAAAATTGATATCAAAGACTCCGGGTCCG 1570
| ||.||.||.|||.|||||||.|||||||||||.|||||.||.|
RBAM_021250__ 1527 C------GTAAAAGACGGACTGAAAATCGATATCAAAGATTCCGGCTCTG 1570
BSNT_03439___ 1571 GCATACCGGAAGAAGATCTGCCATTTATCTTTGAGCGGTTTTATAAGGCA 1620
|.|||||||||||.||.|||||.|||||.|||||.||.||||||||.|||
RBAM_021250__ 1571 GAATACCGGAAGAGGACCTGCCTTTTATTTTTGAACGTTTTTATAAAGCA 1620
BSNT_03439___ 1621 GATAAAGCGCGGACAAGGGGCAGAGCAGGAACCGGGTTAGGGCTGGCTAT 1670
||.|||||..|.|||||.|||||.||.||||||||..|.||.||.||.||
RBAM_021250__ 1621 GACAAAGCAAGAACAAGAGGCAGGGCGGGAACCGGACTCGGACTCGCCAT 1670
BSNT_03439___ 1671 CGTTAAAAATATCGTGGAAGCCCACAACGGCTCAATCACTGTGCACAGCC 1720
|||.|||||||||||||||||||||..|||||||||..|.||.||||||.
RBAM_021250__ 1671 CGTAAAAAATATCGTGGAAGCCCACGGCGGCTCAATTGCGGTTCACAGCA 1720
BSNT_03439___ 1721 GAATAGATAAAGGAACAACATTTACTTTTTATATTCCGACAAAACGGTAA 1770
|.||.||.|||||.||.||.|||||.||||||||||||||||||..|.|.
RBAM_021250__ 1721 GCATCGACAAAGGGACGACGTTTACATTTTATATTCCGACAAAAGCGCAG 1770
BSNT_03439___ 1770 ------------ 1770
RBAM_021250__ 1771 GATGACGTCTGA 1782
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.