Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03436 and RBAM_021230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_03436.1.9828.seq
# -bsequence pep-align/RBAM_021230___rsiX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03436-RBAM_021230___rsiX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03436-RBAM_021230___rsiX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03436
# 2: RBAM_021230___rsiX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 140/376 (37.2%)
# Similarity: 213/376 (56.6%)
# Gaps: 53/376 (14.1%)
# Score: 623.0
#
#
#=======================================
BSNT_03436 1 -------------------------------------MAKRKNKPAVRWI 13
...|| |||..||
RBAM_021230__ 1 MMKSYWNEERVEELLRQLPAVRDHRSPEAIYRNIETGKPYRK-KPARSWI 49
BSNT_03436 14 GPACAAAIAVYIAFIISPHFFDQAQPQQKEASQENAVTKTETEDSPKAAS 63
|||.|...|:.||.|||||. ...::|.:......:||.:.::||
RBAM_021230__ 50 GPAAAGICALCIALIISPHL------MTNKSSGDLTADSRQTEKASQSAS 93
BSNT_03436 64 --SLDHTSFVVPEKEQDNYITVAVADADTSAIIPVSIQKTNADQTIQDML 111
..|..:|||..:.::||||:|.||::|||:||||.:|...|:::.:.|
RBAM_021230__ 94 VKPPDQKTFVVSNQNKNNYITLAFADSETSAVIPVSFEKKKPDESVSEAL 143
BSNT_03436 112 FESSELGILDHAITIPTFIDEVEIKEKPKQKELSIRVHQPATAFSVKDDT 161
.|:..|.:.:..:::|..::.|:: ...:|:|.::|:...:..||.|..
RBAM_021230__ 144 SEAENLEVPESFLSVPNLLEGVQV--TADKKDLLVQVNGRLSIESVADAD 191
BSNT_03436 162 LLKKLLKESLKWSPYEKVKFLSDQNETGVRI-GSYGTFTEISIPKQSKRA 210
||||:|||:|.|||||::|....||..|... .|||...|:|:.||:.||
RBAM_021230__ 192 LLKKMLKETLTWSPYERIKLKKVQNGAGQDFYKSYGISAEMSVHKQTNRA 241
BSNT_03436 211 YYLYKNKQG-NFLIPSEKTFDTVKEAINEMESS-SQEDTTPLIQAGTVQS 258
|:.|.:..| .:|||||:|:.:|.:||:.|::: ....|..:|:|..:.|
RBAM_021230__ 242 YFSYSDSLGQEYLIPSEQTYYSVYQAIDGMKTTDGGSQTASIIEADAIAS 291
BSNT_03436 259 VTKKQ--KHLYIRFSKDSEVEDSIAGILMIEGLLLTAKEFGFTEVTFTET 306
|:::: :.|.|:.|:..:||:|:.||||||||||||||||::||.||..
RBAM_021230__ 292 VSEREDGEQLRIQLSEKHKVENSLEGILMIEGLLLTAKEFGYSEVLFTHA 341
BSNT_03436 307 RTNKIGKYDVSDAIPVPAAPNPIFLN 332
.|.|||.|||:..|.|||||||:..:
RBAM_021230__ 342 HTKKIGNYDVTKPIAVPAAPNPLPSH 367
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