Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03427 and RBAM_021180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_03427___ypbB.1.9828.seq
# -bsequence pep-align/RBAM_021180___ypbB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03427___ypbB-RBAM_021180___ypbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03427___ypbB-RBAM_021180___ypbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03427___ypbB
# 2: RBAM_021180___ypbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 208/356 (58.4%)
# Similarity: 269/356 (75.6%)
# Gaps: 8/356 ( 2.2%)
# Score: 1091.0
#
#
#=======================================
BSNT_03427___ 1 MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKY 50
|::||||.:|||||.||:|||:.||||||.|||:||||||||||||.|||
RBAM_021180__ 1 MAINYFDTVVLDCLDKIDGERTPSAVFHLLKGKKSSQTIQDAGLFQIAKY 50
BSNT_03427___ 51 FGMAAQCSRSDVSESLDKLEKHSYLSPMSETDTYKVTASGAAVLRHALSE 100
||||:.|.|.|::.||.||.::||::...|..|:||||.|...|..|.:|
RBAM_021180__ 51 FGMASHCERGDIAASLHKLTENSYITAGKEEGTWKVTARGVQKLERAFAE 100
BSNT_03427___ 101 RPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTL 150
||||.|||||:||..|..||:|||||:||||:|:....||||||.|.:||
RBAM_021180__ 101 RPWPKHCHGANYQTPAVTLWRRLSLLIQVLSNKEHQCSQYIPVTNDVQTL 150
BSNT_03427___ 151 HWVKKYLSRHTD----HIEMAKSLFAMLEAHLKKIENKAAQIFVYSLTSH 196
.|||:::.::.| .::|.::||.:|:. :..:.|.||||||||.
RBAM_021180__ 151 RWVKRFMRKNRDAKELSVQMHETLFHLLQG----VSERQALIFVYSLTSF 196
BSNT_03427___ 197 HRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALLKDLLSD 246
:|||.|::|||..|.||||||.:.||.:|||.|.|||:|....|::||||
RBAM_021180__ 197 NRIGKTNKQLALQLNEDEWYVSVQFWGAVHYVIQSLPQCAYPALRELLSD 246
BSNT_03427___ 247 VHLDNALTESTRKTWQMVKQGFPIHRIAEIRKLKTATIEDHIVEISLHEP 296
:..::|||:|.|||.:::::||||.|||.:|.||||||||||||||||:|
RBAM_021180__ 247 LQAESALTQSARKTLELLEKGFPIERIAAVRNLKTATIEDHIVEISLHQP 296
BSNT_03427___ 297 AFMINDYVSAEDQLQIAEFAKRMRTNKIKQIRDGLEQRFSYFQIRLALTK 346
||.|..|:|.|:|..|..|||:.:||||||||:|::.|||||||||||.|
RBAM_021180__ 297 AFFIEQYLSEEEQRMITAFAKQHQTNKIKQIREGMQMRFSYFQIRLALAK 346
BSNT_03427___ 347 QVQQYD 352
.|.|:|
RBAM_021180__ 347 TVNQHD 352
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