Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03425 and RBAM_021160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence pep-align/BSNT_03425___ypbD.1.9828.seq
# -bsequence pep-align/RBAM_021160___ypbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03425___ypbD-RBAM_021160___ypbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03425___ypbD-RBAM_021160___ypbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03425___ypbD
# 2: RBAM_021160___ypbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 133/200 (66.5%)
# Similarity: 154/200 (77.0%)
# Gaps: 16/200 ( 8.0%)
# Score: 719.0
#
#
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BSNT_03425___ 1 MTDRDMLKQLYLTQLLIIFAAAAAGLFFFEDVRDVLKLWDIRDMRIIWYG 50
.|||.|||||:..:|..|.|||.|:.|.||||.|||..|||||
RBAM_021160__ 1 -------MQLYATQLLILAVSAVIGFFFFTDIHDFLKLWHIRDDNIIWYG 43
BSNT_03425___ 51 VSIAVIVILADMAVMKWFPSHLYDDGGINKKIFSKRSIPHIIFLTLLIAF 100
|::||:||.||:|||||.|||||||||||..:|..|.:.||:||||||:|
RBAM_021160__ 44 VTLAVLVIFADLAVMKWCPSHLYDDGGINVLLFKNRPVLHILFLTLLISF 93
BSNT_03425___ 101 AEEMLFRGVLQTHIGLWAASLIFAALHFRYLSKWLLFIMVTAISFLLGLM 150
:||:||||||||||||||||.||..||||||:|||||:||..||.||||:
RBAM_021160__ 94 SEEILFRGVLQTHIGLWAASFIFTVLHFRYLAKWLLFMMVAGISLLLGLI 143
BSNT_03425___ 151 YEWTGNLFVPMTAHFIIDAVFACQIRFEHVRRDKHDEHVESREKKSPESL 200
||||||||||:||||||||||||||||::|||..||.:|:|
RBAM_021160__ 144 YEWTGNLFVPVTAHFIIDAVFACQIRFQYVRRGLHDGNVKS--------- 184
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