Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03423 and RBAM_021140

See DNA alignment / Visit BSNT_03423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_03423___ypbF.1.9828.seq
#    -bsequence pep-align/RBAM_021140___ypbF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03423___ypbF-RBAM_021140___ypbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03423___ypbF-RBAM_021140___ypbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03423___ypbF
# 2: RBAM_021140___ypbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     116/152 (76.3%)
# Similarity:   135/152 (88.8%)
# Gaps:           5/152 ( 3.3%)
# Score: 655.5
# 
#
#=======================================

BSNT_03423___      1 MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGL     50
                     |:|||.|||:|.|.|||||||||||||.|:||||.|||||:||||:|..|
RBAM_021140__      1 MDSLWKQLDRFADGPTKQMLQALVKRKLKYENYAVQCRRWQWASLVCFSL     50

BSNT_03423___     51 LCVMIMSKS---PE--PQLILQEILSHTFYLFWMLATAFAYCTSYYFKKK     95
                     :|:::|.||   |:  |||||||||.||.||.|::|:|||||||||||||
RBAM_021140__     51 MCILLMFKSFNAPQASPQLILQEILGHTVYLCWIMASAFAYCTSYYFKKK    100

BSNT_03423___     96 EEKSETDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFE    145
                     |||:|.:|||||||||||||||||||:||:|||||||:|||:||||||||
RBAM_021140__    101 EEKAEGEFHKLRCEIIQKSTDLWPQPEKWRARESVFHLMKHRYDINLYFE    150

BSNT_03423___    146 SK    147
                     ||
RBAM_021140__    151 SK    152


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