Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03421 and RBAM_021130

See DNA alignment / Visit BSNT_03421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_03421___ypbG.1.9828.seq
#    -bsequence pep-align/RBAM_021130___ypbG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03421___ypbG-RBAM_021130___ypbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03421___ypbG-RBAM_021130___ypbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03421___ypbG
# 2: RBAM_021130___ypbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     174/263 (66.2%)
# Similarity:   205/263 (77.9%)
# Gaps:           5/263 ( 1.9%)
# Score: 935.0
# 
#
#=======================================

BSNT_03421___      1 MKLSVKIAGVLTVAAAAMTAKMYATAKGNHLKTHTFPLSKMKGKPPLTIF     50
                     |||:..|.|.|..|||.|.|.||.||.|:|||||||.|.||||..|||||
RBAM_021130__      1 MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIF     50

BSNT_03421___     51 FISDIHKRLIDQDLLEKARSHAPHLVIIGGDLAEGGVPSARIEENIKRLV    100
                     ||||:|:||||:.||.:|..:.|..|::||||||||||.||||||||||.
RBAM_021130__     51 FISDVHRRLIDEKLLREAAGYKPDAVLLGGDLAEGGVPYARIEENIKRLT    100

BSNT_03421___    101 HFGVPIVFVWGNNDYEVRQHKLYSIFKAHGIITLRNESVPFSYNGHTIAI    150
                     .. .|:::|||||||||.|.||.|:.:|:.:|.||||||.|:|.|.|:.|
RBAM_021130__    101 AL-APVMYVWGNNDYEVSQQKLLSLLRAYKVIPLRNESVQFAYKGETVTI    149

BSNT_03421___    151 AGVDDIRMEMDHYEEAIKELDESQLNILVCHNPEIHEQINEDDGIDVILS    200
                     .|||||||.||.||.||:..|..::|:|:||||:||||:.|.||||.:.|
RBAM_021130__    150 CGVDDIRMMMDDYESAIRYTDADKVNLLLCHNPDIHEQMRESDGIDAVFS    199

BSNT_03421___    201 GHTHGGQIRFGKFGPYELGKTGIVKNAAYLISNGYGTTKVPLRLGAEPET    250
                     |||||||||||:|||||||.||.||.|.||||||||||||||||||:|||
RBAM_021130__    200 GHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVPLRLGAKPET    249

BSNT_03421___    251 HIVTLCGPE----    259
                     |::|||||:    
RBAM_021130__    250 HMITLCGPDEPSS    262


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