Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03420 and RBAM_021120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence pep-align/BSNT_03420___ypbH.1.9828.seq
# -bsequence pep-align/RBAM_021120___mecB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03420___ypbH-RBAM_021120___mecB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03420___ypbH-RBAM_021120___mecB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03420___ypbH
# 2: RBAM_021120___mecB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 175/194 (90.2%)
# Similarity: 184/194 (94.8%)
# Gaps: 0/194 ( 0.0%)
# Score: 914.0
#
#
#=======================================
BSNT_03420___ 1 MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVHQLFKDMMNEANT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021120__ 1 MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVHQLFKDMMNEANT 50
BSNT_03420___ 51 ELGFEANGPIAVEVYSLQAQGMVVIVTKNQDADSEDDEYDDDYIEMQVKL 100
|||||||||||||||||||||||||||||.|||:||||||||||||||||
RBAM_021120__ 51 ELGFEANGPIAVEVYSLQAQGMVVIVTKNHDADAEDDEYDDDYIEMQVKL 100
BSNT_03420___ 101 DESADIIYQFHSFEDIIQLSESLQRIGITGGTVYHYDGQYFLSLEDLGSH 150
|||.|||||||||||||||:.||.||||||||||||:.||::|||||||.
RBAM_021120__ 101 DESPDIIYQFHSFEDIIQLAGSLHRIGITGGTVYHYENQYYVSLEDLGSR 150
BSNT_03420___ 151 TAEGVVAVLAEYGNPTTLTIYRLQEYGKLIMDGNAVETIQTHFS 194
:||||:|||||||:|.|:|||||.|||||||||||||||..|||
RBAM_021120__ 151 SAEGVIAVLAEYGHPATITIYRLHEYGKLIMDGNAVETIHKHFS 194
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