Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03412 and RBAM_021080

See DNA alignment / Visit BSNT_03412 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_03412___sleB.1.9828.seq
#    -bsequence pep-align/RBAM_021080___sleB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03412___sleB-RBAM_021080___sleB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03412___sleB-RBAM_021080___sleB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03412___sleB
# 2: RBAM_021080___sleB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     233/305 (76.4%)
# Similarity:   255/305 (83.6%)
# Gaps:          16/305 ( 5.2%)
# Score: 1218.5
# 
#
#=======================================

BSNT_03412___      1 MKSKGSIMACLILFSFTITTFFNTETISAFSNQVIQRGATGDDVVELQAR     50
                     ||.||:.|||||||||....|.:.||:.||||||||||||||||:|||||
RBAM_021080__      1 MKCKGAFMACLILFSFAAAFFDHHETVHAFSNQVIQRGATGDDVIELQAR     50

BSNT_03412___     51 LQYNGYYNGKIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAKTKQTLICK    100
                     |||||:|||||||||||.|||||||||::||:|.|||||||||||.||.|
RBAM_021080__     51 LQYNGFYNGKIDGVYGWTTYWAVRNFQEKFGMKPVDGLVGAKTKQVLISK    100

BSNT_03412___    101 SKYYREYVMEQLNKGNTFTHYGKIPLKYQTKPSKAATQKARQQAEARQKQ    150
                     |||||||||||:.|||||||||.:|||.|||| :|.|||     .|...:
RBAM_021080__    101 SKYYREYVMEQIQKGNTFTHYGNVPLKNQTKP-RAGTQK-----PAGTNK    144

BSNT_03412___    151 PAEKTTQQPKANANKQQNNTPAKARKQDAVAANMPGGFSNNDIRLLAQAV    200
                     ||:|...:....:|::||.|          |||||||||||||.||||||
RBAM_021080__    145 PAQKPQNKTGGQSNQKQNTT----------AANMPGGFSNNDINLLAQAV    184

BSNT_03412___    201 YGEARGEPYEGQVAIAAVILNRLNSPLFPNSVAGVIFEPLAFTAVADGQI    250
                     ||||||||:|||||||||||||:.||||||:|||||||||||||||||||
RBAM_021080__    185 YGEARGEPFEGQVAIAAVILNRIKSPLFPNTVAGVIFEPLAFTAVADGQI    234

BSNT_03412___    251 YMQPNETAREAVLDAINGWDPSEEALYYFNPDTATSPWIWGRPQIKRIGK    300
                     ||||||.|:||||||||||||||.|:||||||||||.|||||||||||||
RBAM_021080__    235 YMQPNERAKEAVLDAINGWDPSENAIYYFNPDTATSKWIWGRPQIKRIGK    284

BSNT_03412___    301 HIFCE    305
                     |||||
RBAM_021080__    285 HIFCE    289


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