Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03407 and RBAM_021050

See DNA alignment / Visit BSNT_03407 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_03407___ypfB.1.9828.seq
#    -bsequence pep-align/RBAM_021050___ypfB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03407___ypfB-RBAM_021050___ypfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03407___ypfB-RBAM_021050___ypfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03407___ypfB
# 2: RBAM_021050___ypfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      39/58 (67.2%)
# Similarity:    44/58 (75.9%)
# Gaps:           0/58 ( 0.0%)
# Score: 192.0
# 
#
#=======================================

BSNT_03407___      1 MKTFERLLIKLLFIQAIILLGVQFLFHYQHIEPYVSKVIQYEGVDNMEGD     50
                     ||||||||:||:.||.|||..||||.|||.||||:||.::|||||.||..
RBAM_021050__      1 MKTFERLLVKLVCIQLIILGAVQFLLHYQPIEPYISKAVKYEGVDKMEKK     50

BSNT_03407___     51 NKIETFKH     58
                     ..|||.|.
RBAM_021050__     51 EWIETVKR     58


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.