Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03407 and RBAM_021050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_03407___ypfB.1.9828.seq
# -bsequence dna-align/RBAM_021050___ypfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03407___ypfB-RBAM_021050___ypfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03407___ypfB-RBAM_021050___ypfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03407___ypfB
# 2: RBAM_021050___ypfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 132/188 (70.2%)
# Similarity: 132/188 (70.2%)
# Gaps: 22/188 (11.7%)
# Score: 456.0
#
#
#=======================================
BSNT_03407___ 1 ATGAAAACATTTGAACGGCTGCTGATCAAATTATTGTTCATTCAGGCCAT 50
||||||||.||||||||.||||||.|||||||..|.|.|||||||...||
RBAM_021050__ 1 ATGAAAACGTTTGAACGTCTGCTGGTCAAATTGGTCTGCATTCAGCTTAT 50
BSNT_03407___ 51 CATTTT--ACTTGGTGTCCAATTTCTTTTTCACTATCAGCATATTGAACC 98
|||||| .|..|||| ||||||.|..||||.|||||||.|||||||||
RBAM_021050__ 51 CATTTTGGGCGCGGTG--CAATTTTTGCTTCATTATCAGCCTATTGAACC 98
BSNT_03407___ 99 ATACGTATCAAAA---GTGATTCAATATGAAGGGGTGGATAACATGGAGG 145
.||..|.||.||| |||| |||||||.||.||.|||||.||||||
RBAM_021050__ 99 TTATATTTCGAAAGCTGTGA---AATATGAGGGAGTTGATAAAATGGAG- 144
BSNT_03407___ 146 GGGACAATAA------GATTGAAACCTTCAAACATTAA 177
||.|| |||||||||..|.||.|..|||
RBAM_021050__ 145 -----AAAAAAGAATGGATTGAAACGGTAAAGCGGTAA 177
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