Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03403 and RBAM_021020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence pep-align/BSNT_03403___ypgA.1.9828.seq
# -bsequence pep-align/RBAM_021020___fni.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03403___ypgA-RBAM_021020___fni.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03403___ypgA-RBAM_021020___fni.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03403___ypgA
# 2: RBAM_021020___fni
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity: 273/349 (78.2%)
# Similarity: 310/349 (88.8%)
# Gaps: 0/349 ( 0.0%)
# Score: 1369.0
#
#
#=======================================
BSNT_03403___ 1 MTRAERKRQHINHALSTGQKRETGLDDITFVHVSLPDLALEQVDISTKIG 50
||||||||:||||||||||.||||||||||||||||:||||:||||||||
RBAM_021020__ 1 MTRAERKREHINHALSTGQNRETGLDDITFVHVSLPNLALEKVDISTKIG 50
BSNT_03403___ 51 ELSSSSPIFINAMTGGGGKLTYEINKSLARAAYQAGIPLAVGSQMSALKD 100
.|:|||||||||||||||:||||||:||||||.:||:|||||||||||||
RBAM_021020__ 51 GLTSSSPIFINAMTGGGGQLTYEINRSLARAARKAGMPLAVGSQMSALKD 100
BSNT_03403___ 101 PSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNV 150
||||.||||||||||:|||||||||||.|.|||.||:||.|:||||||||
RBAM_021020__ 101 PSERCSYEIVRKENPDGLIFANLGSEADAEQAKMAVDMIQADALQIHLNV 150
BSNT_03403___ 151 IQEIVMPEGDRSFSGALERIEQICSHVSVPVIVKEVGFGMSKESAGKLYE 200
|||||||||||||:|||.|||:|.:...|||.|||||||||:|||.:|::
RBAM_021020__ 151 IQEIVMPEGDRSFTGALGRIERIAAEAGVPVFVKEVGFGMSRESARQLFD 200
BSNT_03403___ 201 AGAAAVDIGGYGGTNFSKIENLRRQRKISFFNSWGISTAASLAEIRSEFP 250
|||||||.|||||||||||||:||::.:.|||:||||||||||||.|...
RBAM_021020__ 201 AGAAAVDAGGYGGTNFSKIENMRREKALQFFNTWGISTAASLAEIHSLSA 250
BSNT_03403___ 251 ASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQ 300
..::|||||||.||||||:||||||..||||.||||||..|||||.:|:.
RBAM_021020__ 251 DQSIIASGGLQSALDVAKSIALGASGAGMAGTFLKALTSKGEEGLFDEMT 300
BSNT_03403___ 301 LILEELKMIMTVLGARTIDDLQKAPLVIKGETHHWLTERGINTSSYSVR 349
.:|:|||||||.||.:::..||||||||||:|||||:||||:||.:|.|
RBAM_021020__ 301 ALLQELKMIMTALGCQSVSQLQKAPLVIKGDTHHWLSERGIDTSRFSRR 349
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