Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03399 and RBAM_021010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence pep-align/BSNT_03399___yphA.1.9828.seq
# -bsequence pep-align/RBAM_021010___yphA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03399___yphA-RBAM_021010___yphA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03399___yphA-RBAM_021010___yphA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03399___yphA
# 2: RBAM_021010___yphA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 132/200 (66.0%)
# Similarity: 161/200 (80.5%)
# Gaps: 1/200 ( 0.5%)
# Score: 710.0
#
#
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BSNT_03399___ 1 MEQFYYYWSMWFLWVLTTFIFEKTKRRIAVSVFILTNIILSIHDIALYFS 50
||.|||||||||||:|.||||.|||.|..||||||||::.|||.|..||:
RBAM_021010__ 1 MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFT 50
BSNT_03399___ 51 LNVAYLMFFVCGCVYAGYLGMY-RFRYIMVYLTLVAAYAFVYLFALYDPV 99
||.||:|||....||||.|||: |.|.|:::||..|||.|::||||||||
RBAM_021010__ 51 LNAAYVMFFAAAFVYAGSLGMHKRLRNIVIHLTAAAAYGFIFLFALYDPV 100
BSNT_03399___ 100 WFIIKPEWAAVILIVLLTASVERNFEKQLVLFVLGMCQGELVYSFVIQKL 149
|||||||||||||:.::|.|||..|.::|.|||||||||||:|:.||:.:
RBAM_021010__ 101 WFIIKPEWAAVILLTVITLSVEGRFPERLCLFVLGMCQGELLYAAVIRNI 150
BSNT_03399___ 150 AGAMAVGGFQWLNACSAGMILLFGISKYEHLASQIGQKSKRSNKGATKMS 199
|||.|||.::||:.||||:|||.|::.||.||::|.||||:..|||||||
RBAM_021010__ 151 AGAAAVGDYKWLSGCSAGVILLVGLTTYEQLAARISQKSKKQGKGATKMS 200
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