Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03395 and RBAM_021000

See DNA alignment / Visit BSNT_03395 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_03395___engA.1.9828.seq
#    -bsequence pep-align/RBAM_021000___engA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03395___engA-RBAM_021000___engA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03395___engA-RBAM_021000___engA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03395___engA
# 2: RBAM_021000___engA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     416/436 (95.4%)
# Similarity:   430/436 (98.6%)
# Gaps:           0/436 ( 0.0%)
# Score: 2152.0
# 
#
#=======================================

BSNT_03395___      1 MGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_021000__      1 MGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLN     50

BSNT_03395___     51 YDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAAD    100
                     |||||||||||||||||||.|||||||||||||||||||||||||||:||
RBAM_021000__     51 YDFNLIDTGGIDIGDEPFLTQIRQQAEIAMDEADVIIFMVNGREGVTSAD    100

BSNT_03395___    101 EEVAKILYRTKKPVVLAVNKLDNTEMRANIYDFYSLGFGEPYPISGTHGL    150
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
RBAM_021000__    101 EEVAKILYRTKKPVVLAVNKLDNTEMRANIYDFYALGFGEPYPISGTHGL    150

BSNT_03395___    151 GLGDLLDAVAEHFKNIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEER    200
                     ||||||||.||||||||||||:::||||||||||||||||||||||||||
RBAM_021000__    151 GLGDLLDACAEHFKNIPETKYSDDVVQFCLIGRPNVGKSSLVNAMLGEER    200

BSNT_03395___    201 VIVSNVAGTTRDAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLR    250
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_021000__    201 VIVSNVAGTTRDAVDTAFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLR    250

BSNT_03395___    251 ALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVD    300
                     ||||||||:||.|||:.||||:|||||||||||||||||||:||||||||
RBAM_021000__    251 ALKAIDRSDVVGVVLNAEEGILEQDKRIAGYAHEAGKAVVIIVNKWDAVD    300

BSNT_03395___    301 KDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENH    350
                     |||.||||||:|||:|||||||||:|||||||.|||||||||||||||||
RBAM_021000__    301 KDERTMKEFEQNIREHFQFLDYAPVLFMSALTTKRIHTLMPAIIKASENH    350

BSNT_03395___    351 SLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVN    400
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
RBAM_021000__    351 SLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVAVKPPSFVVFVN    400

BSNT_03395___    401 DPELMHFSYERFLENRIRDAFGFEGTPIKIFARARK    436
                     ||||||||||||||||||||||||||||||||||||
RBAM_021000__    401 DPELMHFSYERFLENRIRDAFGFEGTPIKIFARARK    436


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