Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03394 and RBAM_020990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence pep-align/BSNT_03394___gpsA.1.9828.seq
# -bsequence pep-align/RBAM_020990___gpsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03394___gpsA-RBAM_020990___gpsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03394___gpsA-RBAM_020990___gpsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03394___gpsA
# 2: RBAM_020990___gpsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 295/345 (85.5%)
# Similarity: 324/345 (93.9%)
# Gaps: 0/345 ( 0.0%)
# Score: 1513.0
#
#
#=======================================
BSNT_03394___ 1 MKKVTMLGAGSWGTALALVLTDNGNEVCVWAHRADLIHQINELHENKDYL 50
||||.|||||||||||:|||.|||::|.:|.|||:||.||||||||||||
RBAM_020990__ 1 MKKVAMLGAGSWGTALSLVLADNGHQVMMWGHRAELIDQINELHENKDYL 50
BSNT_03394___ 51 PNVKLSTSIKGTTDMKEAVSDADVIIVAVPTKAIREVLRQAVPFITKKAV 100
|.|:||:||.||.|:.||:..||.||||||||||||||::|:|:|.|:::
RBAM_020990__ 51 PGVELSSSIIGTADLSEALKGADFIIVAVPTKAIREVLKKALPYIPKQSI 100
BSNT_03394___ 101 FVHVSKGIEPDSLLRISEIMEIELPSDVRKDIVVLSGPSHAEEVGLRHPT 150
||||||||||||||||||:||.|||.:.||||||||||||||||||||||
RBAM_020990__ 101 FVHVSKGIEPDSLLRISELMEEELPEEYRKDIVVLSGPSHAEEVGLRHPT 150
BSNT_03394___ 151 TVTASSKSMRAAEEVQDLFINHNFRVYTNPDIIGVEIGGALKNIIALAAG 200
|||:|||:::|||.|||||:|.:||||||||:||||||||||||||||||
RBAM_020990__ 151 TVTSSSKNIKAAEAVQDLFMNQHFRVYTNPDMIGVEIGGALKNIIALAAG 200
BSNT_03394___ 201 ITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGVGDLIVTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020990__ 201 ITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGVGDLIVTC 250
BSNT_03394___ 251 TSVHSRNWRAGNLLGKGYKLEDVLEEMGMVVEGVRTTKAAYQLSKKYDVK 300
|||||||||||||||||||||.||::||||||||||||||||||:||.||
RBAM_020990__ 251 TSVHSRNWRAGNLLGKGYKLEAVLDKMGMVVEGVRTTKAAYQLSQKYQVK 300
BSNT_03394___ 301 MPITEALHQVLFNGQKVETAVESLMARGKTHEMEDLVNTFENQVK 345
|||||||||||||||||||||||||||.||||||||||||||:||
RBAM_020990__ 301 MPITEALHQVLFNGQKVETAVESLMARVKTHEMEDLVNTFENRVK 345
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