Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03392 and RBAM_020970

See DNA alignment / Visit BSNT_03392 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence pep-align/BSNT_03392___yphF.1.9828.seq
#    -bsequence pep-align/RBAM_020970___yphF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03392___yphF-RBAM_020970___yphF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03392___yphF-RBAM_020970___yphF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03392___yphF
# 2: RBAM_020970___yphF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     168/245 (68.6%)
# Similarity:   206/245 (84.1%)
# Gaps:           2/245 ( 0.8%)
# Score: 889.0
# 
#
#=======================================

BSNT_03392___      1 MGKLKCAIIFA-AVVFLSGCLYPNERKSSVHAIPYQDQLKQVQSAVDEFQ     49
                     |.|||.|:|.| ||:.|||||||...|:. :.:.|:.||:|||:|||||:
RBAM_020970__      1 MHKLKMAVITAMAVLLLSGCLYPEAEKTE-NKVSYKHQLQQVQAAVDEFK     49

BSNT_03392___     50 KANGGLLPIQTKDMSTPLYQKYPIDFNRLAPRYIAEPPSTAFESGGDYQY     99
                     ||||||||||||||.|||||||||||.|||||||.|||::|:||||.|||
RBAM_020970__     50 KANGGLLPIQTKDMKTPLYQKYPIDFKRLAPRYIEEPPASAYESGGMYQY     99

BSNT_03392___    100 VLVDVENDPTVKLIDLKMAEKIRDVKLRIQMYRQEHQYPPYKDVLSRDLF    149
                     ||||||:.|||||:||:|||.|||:|||::||:::|.||||:|.:|:.||
RBAM_020970__    100 VLVDVEHKPTVKLVDLQMAEAIRDMKLRVKMYQEKHTYPPYEDAVSKGLF    149

BSNT_03392___    150 TLDEKKLGDGSSLTVTSPISGNSLPLMIDGDGEIYADYRTELTSCLKKSK    199
                     ||::||||...|.:|.||:||.||||:|..|||||||||.:|..|||::|
RBAM_020970__    150 TLNKKKLGMKDSPSVKSPVSGTSLPLLIGADGEIYADYRVDLARCLKENK    199

BSNT_03392___    200 KTFKPGTEIQDMIWEETPFVPAFSVKYTVNDKQEPVFLENDMKKE    244
                     |..|||.||||::|:||||||||||.||||:||||||||:..|:|
RBAM_020970__    200 KKIKPGAEIQDILWKETPFVPAFSVTYTVNEKQEPVFLESQTKQE    244


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