Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03383 and RBAM_020920

See DNA alignment / Visit BSNT_03383 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_03383___hepS.1.9828.seq
#    -bsequence pep-align/RBAM_020920___hepS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03383___hepS-RBAM_020920___hepS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03383___hepS-RBAM_020920___hepS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03383___hepS
# 2: RBAM_020920___hepS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     212/254 (83.5%)
# Similarity:   234/254 (92.1%)
# Gaps:           3/254 ( 1.2%)
# Score: 1110.0
# 
#
#=======================================

BSNT_03383___      1 ---MQDIYGTLANLNTKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEE     47
                        :|||||||||||.||||||||||||||||||||||||||||||||||
RBAM_020920__      1 MIFLQDIYGTLANLNMKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEE     50

BSNT_03383___     48 ADIKNNDRENYIVTAMLVQSALDTHDEVTTARVIKRDENKNRQLTVLAGD     97
                     ||||||||||||||||||||||||||||||||.:||||||||||||||||
RBAM_020920__     51 ADIKNNDRENYIVTAMLVQSALDTHDEVTTARALKRDENKNRQLTVLAGD    100

BSNT_03383___     98 YFSGLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSFKDENDFFES    147
                     ||||||||||||||||||||||||||||||||||||||||..|.|...||
RBAM_020920__    101 YFSGLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSVNDLNQLIES    150

BSNT_03383___    148 VGIVESALFHRVAEHFSLPRWKKLSSDFFVFKRLMNGNDAFLDVIGSFIQ    197
                     :.|||:||||||::||:|||||:|:|||||:|||||||..||||||:.::
RBAM_020920__    151 MAIVEAALFHRVSDHFNLPRWKELASDFFVYKRLMNGNAIFLDVIGNIVK    200

BSNT_03383___    198 LGKTKEEILEDCFKKAKNSIESLLPLNSPIQNILINRLKTISQDQTYHQK    247
                     .||:|.:|:||.|:|||.|||:||||||||||:::||||.||||:|||||
RBAM_020920__    201 SGKSKADIMEDSFRKAKQSIETLLPLNSPIQNLMLNRLKAISQDKTYHQK    250

BSNT_03383___    248 VEEG    251
                     ||||
RBAM_020920__    251 VEEG    254


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