Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03380 and RBAM_020890

See DNA alignment / Visit BSNT_03380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_03380___ndk.1.9828.seq
#    -bsequence pep-align/RBAM_020890___ndk.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03380___ndk-RBAM_020890___ndk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03380___ndk-RBAM_020890___ndk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03380___ndk
# 2: RBAM_020890___ndk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     134/148 (90.5%)
# Similarity:   144/148 (97.3%)
# Gaps:           0/148 ( 0.0%)
# Score: 710.0
# 
#
#=======================================

BSNT_03380___      1 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYA     50
                     |||||||||||||||||||:||||||||||||||||||:|:|||||.|||
RBAM_020890__      1 MEKTFIMVKPDGVQRQLIGEILSRFERKGLQLAGAKLMQVSEQMAETHYA     50

BSNT_03380___     51 EHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGT    100
                     ||:|||||||||||||||||||||||||||:|:|||||||||||:|||||
RBAM_020890__     51 EHKGKPFFGELVEFITSGPVFAMVWEGENVVEITRQLIGKTNPKDALPGT    100

BSNT_03380___    101 IRGDYGMFVGKNIIHGSDSLESAEREINIFFKNEELVSYQQLMAGWIY    148
                     |||||||||||||||||||||||||||:||||.||||.||:|||.|:|
RBAM_020890__    101 IRGDYGMFVGKNIIHGSDSLESAEREIHIFFKQEELVPYQKLMADWVY    148


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