Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03380 and RBAM_020890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03380___ndk.1.9828.seq
# -bsequence dna-align/RBAM_020890___ndk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03380___ndk-RBAM_020890___ndk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03380___ndk-RBAM_020890___ndk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03380___ndk
# 2: RBAM_020890___ndk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 348/447 (77.9%)
# Similarity: 348/447 (77.9%)
# Gaps: 0/447 ( 0.0%)
# Score: 1344.0
#
#
#=======================================
BSNT_03380___ 1 ATGGAAAAGACTTTTATCATGGTGAAACCAGACGGTGTCCAACGTCAGCT 50
||||||||.||||||||||||||.|||||.|||||.||.||.||.|||||
RBAM_020890__ 1 ATGGAAAAAACTTTTATCATGGTAAAACCGGACGGCGTACAGCGCCAGCT 50
BSNT_03380___ 51 CATTGGGGACATTTTATCTAGATTCGAACGTAAGGGCTTACAATTAGCTG 100
.||.||.||.||||||||.|||||.||.|||||||||||||||||.||.|
RBAM_020890__ 51 GATCGGAGAGATTTTATCCAGATTTGAGCGTAAGGGCTTACAATTGGCAG 100
BSNT_03380___ 101 GCGCCAAGTTAATGAGAGTGACTGAACAAATGGCTGAGAAACACTACGCC 150
|.||||||.|||||..|||..|.|||||.||||||||.|..||.||.||.
RBAM_020890__ 101 GAGCCAAGCTAATGCAAGTTTCAGAACAGATGGCTGAAACCCATTATGCT 150
BSNT_03380___ 151 GAACATCAAGGAAAGCCTTTCTTCGGAGAGCTCGTTGAGTTTATTACTTC 200
||||||.||||.|||||.||.|||||.|||||.||.||.||.|||||.||
RBAM_020890__ 151 GAACATAAAGGGAAGCCGTTTTTCGGCGAGCTTGTGGAATTCATTACATC 200
BSNT_03380___ 201 AGGACCAGTATTCGCAATGGTGTGGGAAGGCGAAAATGTCATTGAAGTGA 250
||||||.|||||.||||||||.||||||||.||||||||..|.||..|.|
RBAM_020890__ 201 AGGACCCGTATTTGCAATGGTATGGGAAGGGGAAAATGTAGTAGAGATCA 250
BSNT_03380___ 251 CGAGACAGCTGATCGGGAAAACAAACCCTAAAGAAGCTTTACCTGGTACG 300
|.||||||||||||||.|||||.|||||.|||||.||..|.||.||.||.
RBAM_020890__ 251 CAAGACAGCTGATCGGAAAAACGAACCCGAAAGATGCACTGCCGGGCACA 300
BSNT_03380___ 301 ATTCGTGGGGATTATGGCATGTTTGTCGGAAAAAACATCATCCACGGCTC 350
||.||.||.||.||.||||||||||||||.|||||.|||||.|||||.||
RBAM_020890__ 301 ATCCGCGGTGACTACGGCATGTTTGTCGGCAAAAATATCATTCACGGTTC 350
BSNT_03380___ 351 TGATTCTCTCGAAAGTGCAGAACGCGAGATTAACATTTTCTTTAAGAATG 400
.||.||..|.|||||.||.||.||.||.|||.|||||||||||||..|.|
RBAM_020890__ 351 AGACTCCTTAGAAAGCGCTGAGCGGGAAATTCACATTTTCTTTAAACAGG 400
BSNT_03380___ 401 AAGAATTAGTATCATATCAGCAGCTTATGGCAGGCTGGATCTATTAA 447
||||..|.|||.|.|||||..|..|.|||||.|.||||.|.||.|||
RBAM_020890__ 401 AAGAGCTTGTACCGTATCAAAAATTAATGGCCGACTGGGTGTACTAA 447
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