Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03372 and RBAM_020840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_03372___trpE.1.9828.seq
# -bsequence pep-align/RBAM_020840___trpE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03372___trpE-RBAM_020840___trpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03372___trpE-RBAM_020840___trpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03372___trpE
# 2: RBAM_020840___trpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 515
# Identity: 397/515 (77.1%)
# Similarity: 445/515 (86.4%)
# Gaps: 0/515 ( 0.0%)
# Score: 2079.0
#
#
#=======================================
BSNT_03372___ 1 MNFQSNISAFLEDSLSHHTIPIVETFTVDTLTPIQMIEKLDREITYLLES 50
||.||::|.||:|||:|.||||.|||||||:|||||:|||||.|||||||
RBAM_020840__ 1 MNLQSDVSLFLKDSLTHRTIPIAETFTVDTITPIQMVEKLDRNITYLLES 50
BSNT_03372___ 51 KDDTSTWSRYSFIGLNPFLTIKEEQGCFSAADQDSKSLYTGNELKEVLNW 100
||::|:|||||||||:||:||||....|:|||.:..:|:...|||.||:|
RBAM_020840__ 51 KDESSSWSRYSFIGLDPFITIKESHNTFTAADPNGHTLFEAGELKAVLDW 100
BSNT_03372___ 101 MNTTYKIKTPQLGIPFVGGAVGYLSYDMIPLIEPSVPSHTKETDMEKCML 150
||.:::||||:|.|||.||||||||||||||||||||||.|.||.|||||
RBAM_020840__ 101 MNESFRIKTPELDIPFSGGAVGYLSYDMIPLIEPSVPSHAKVTDFEKCML 150
BSNT_03372___ 151 FVCRTLIAYDHETKNVHFIQYARLNGEETKNEKMDVFHQNHLELQNLIEK 200
||||.:||||||||.|||||||.|||.||:.||..||.:|..||:.||..
RBAM_020840__ 151 FVCRKIIAYDHETKQVHFIQYAELNGRETEEEKRAVFKENCAELRKLIGI 200
BSNT_03372___ 201 MMDQKNIKELFLSADSYKTPSFETVSSNYEKSAFMADVEKIKSYIKTGDI 250
:.:.|::||.|.|.:::.||||..|:|||.|..|||.|.|:|.|||.|||
RBAM_020840__ 201 LTESKDMKEPFFSKETFDTPSFAAVTSNYTKEEFMAGVNKLKEYIKAGDI 250
BSNT_03372___ 251 FQGVLSQKFEVPIKADAFELYRVLRIVNPSPYMYYMKLLDREIVGSSPER 300
|||||||||::|:...:||||||||||||||||||:||.||:||||||||
RBAM_020840__ 251 FQGVLSQKFDIPVSRHSFELYRVLRIVNPSPYMYYIKLPDRDIVGSSPER 300
BSNT_03372___ 301 LIHVQDGHLEIHPIAGTRKRGADKAEDERLKVELMKDEKEKAEHYMLVDL 350
||.|.|.|||||||||||:|||.|.||||||.|||.||||||||||||||
RBAM_020840__ 301 LIRVHDRHLEIHPIAGTRRRGAGKEEDERLKKELMNDEKEKAEHYMLVDL 350
BSNT_03372___ 351 ARNDIGRVAEYGSVSVPEFTKIVSFSHVMHIISVVTGRLKKGVHPVDALM 400
||||||||||||||:||||||:||||||||||||||||||:|:|||||||
RBAM_020840__ 351 ARNDIGRVAEYGSVAVPEFTKVVSFSHVMHIISVVTGRLKQGIHPVDALM 400
BSNT_03372___ 401 SAFPAGTLTGAPKIRAMQLLQELEPTPRETYGGCIAYIGFDGNIDSCITI 450
||||||||||||||||||||.|||||.|||||||||||||||:|||||||
RBAM_020840__ 401 SAFPAGTLTGAPKIRAMQLLNELEPTSRETYGGCIAYIGFDGSIDSCITI 450
BSNT_03372___ 451 RTMSVKNGVASIQAGAGIVADSVPEAEYEESCNKAGALLKTIHIAEDMFH 500
||||||||.||:||||||||||||||||||||||||||||||.||||:|.
RBAM_020840__ 451 RTMSVKNGTASVQAGAGIVADSVPEAEYEESCNKAGALLKTIQIAEDIFS 500
BSNT_03372___ 501 SKEDKADEQISTIVR 515
..|:|.|||||.|||
RBAM_020840__ 501 GGEEKTDEQISAIVR 515
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