Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03370 and RBAM_020830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_03370___trpD.1.9828.seq
# -bsequence pep-align/RBAM_020830___trpD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03370___trpD-RBAM_020830___trpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03370___trpD-RBAM_020830___trpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03370___trpD
# 2: RBAM_020830___trpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 258/338 (76.3%)
# Similarity: 285/338 (84.3%)
# Gaps: 0/338 ( 0.0%)
# Score: 1279.0
#
#
#=======================================
BSNT_03370___ 1 MNRFLQLCVDGKTLTAGEAETLMNMMMAAEMTPSEMGGILSILAHRGETP 50
||:|||.||:|:||..||||.||.|||..:|:.||:|||||:|||||||.
RBAM_020830__ 1 MNKFLQSCVNGRTLKTGEAEKLMEMMMNGDMSQSEIGGILSVLAHRGETA 50
BSNT_03370___ 51 EELAGFVKAMRAHALTVDGLPDIVDTCGTGGDGISTFNISTASAIVASAA 100
||||||||.|||.|.|..||.|:|||||||||||||||||||:||.||||
RBAM_020830__ 51 EELAGFVKVMRARAQTSGGLADVVDTCGTGGDGISTFNISTAAAITASAA 100
BSNT_03370___ 101 GAKIAKHGNRSVSSKSGSADVLEELEVSIQTTPEKVKSSIETNNMGFLFA 150
|||:|||||||||||||||||||:|.||||.|||.||.|||...||||||
RBAM_020830__ 101 GAKVAKHGNRSVSSKSGSADVLEKLGVSIQATPESVKRSIEMKQMGFLFA 150
BSNT_03370___ 151 PLYYSSMKHVAGTRKELGFRTVFNLLGPLSNPLQAKRQVIGVYSVEKAGL 200
||::|||||||..|||||||||||||||||||||.|||||||||.:||.|
RBAM_020830__ 151 PLFHSSMKHVAAARKELGFRTVFNLLGPLSNPLQVKRQVIGVYSFDKARL 200
BSNT_03370___ 201 MASALETFQPKHVMFVSSRDGLDELSITAPTDVIELKDGERREYTVSPED 250
||||||.|..:|||.||:||||||||||||||:||||:|||.||:||||.
RBAM_020830__ 201 MASALEQFDVRHVMLVSARDGLDELSITAPTDIIELKNGERLEYSVSPEQ 250
BSNT_03370___ 251 FGFTNGRLEDLQVQSPKESAYLIQNIFENKSSSSALSITAFNAGAAIYTA 300
|||..|.|:|:||.|.:|||.||||||.||:.||||.|||.|||||||||
RBAM_020830__ 251 FGFAEGSLKDIQVSSSEESALLIQNIFANKAPSSALHITALNAGAAIYTA 300
BSNT_03370___ 301 GITASLKEGTELALETITSGGAAAQLERLKQKEEEIYA 338
|:...|||||:.|||.|.:|.|..|||||||||||:||
RBAM_020830__ 301 GLANDLKEGTKTALEAIQNGDAKRQLERLKQKEEEMYA 338
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