Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03369 and RBAM_020820

See DNA alignment / Visit BSNT_03369 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence pep-align/BSNT_03369___trpC.1.9828.seq
#    -bsequence pep-align/RBAM_020820___trpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03369___trpC-RBAM_020820___trpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03369___trpC-RBAM_020820___trpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03369___trpC
# 2: RBAM_020820___trpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     189/250 (75.6%)
# Similarity:   216/250 (86.4%)
# Gaps:           0/250 ( 0.0%)
# Score: 934.0
# 
#
#=======================================

BSNT_03369___      1 MLEKIIKQKKEEVKTLVLPVEQPFEKRSFKEALASPNRFIGLIAEVKKAS     50
                     ||::||:|||||:|::|||.....|:||||:||.:|||||||||||||||
RBAM_020820__      1 MLDQIIQQKKEEIKSIVLPETCQIERRSFKKALQNPNRFIGLIAEVKKAS     50

BSNT_03369___     51 PSKGLIKEDFVPVQIAIDYEAAKADAISVLTDTPFFQGENSYLSDVKRAV    100
                     ||||||||.|||..||.|||||||||:||||||.||||.|.:|:|||:.|
RBAM_020820__     51 PSKGLIKEHFVPETIAADYEAAKADALSVLTDTRFFQGRNQFLTDVKQTV    100

BSNT_03369___    101 SIPVLRKDFILDSLQVEESRRIGADAILLIGEVLDPLHLHELYLEAGEKG    150
                     |:||||||||:||||||||.||||||||||||.|:|..||||||||.|||
RBAM_020820__    101 SLPVLRKDFIIDSLQVEESFRIGADAILLIGEALEPSELHELYLEAREKG    150

BSNT_03369___    151 MDVLVEVHDASTLEQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVP    200
                     |||||||||.:.||:||:||.|||||:|||:||||.|||.|||:||.|||
RBAM_020820__    151 MDVLVEVHDETVLERILQVFQPDILGINNRDLKTFRTSVSQTEKIAQLVP    200

BSNT_03369___    201 KESLLVSESGIGSLEHLTFVNEHGARAVLIGESLMRQTSQRKAIHALFGE    250
                     ...|||||||||||..|.|||:|||:|||:||||||:.||:|||..||||
RBAM_020820__    201 DGCLLVSESGIGSLADLQFVNKHGAQAVLVGESLMREDSQQKAIRGLFGE    250


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