Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03368 and RBAM_020810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_03368___trpF.1.9828.seq
# -bsequence pep-align/RBAM_020810___trpF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03368___trpF-RBAM_020810___trpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03368___trpF-RBAM_020810___trpF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03368___trpF
# 2: RBAM_020810___trpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 141/217 (65.0%)
# Similarity: 170/217 (78.3%)
# Gaps: 2/217 ( 0.9%)
# Score: 716.5
#
#
#=======================================
BSNT_03368___ 1 MKKPALKYCGIRSLKDLQLAAESQADYLGFIFAESKRKVSPEDVKKWLNQ 50
||||.:|||||||.:|.:|||.|.|||||||||.|||:|:|.:|:||..:
RBAM_020810__ 1 MKKPEVKYCGIRSKRDYELAAASGADYLGFIFAASKRRVTPGEVRKWKEK 50
BSNT_03368___ 51 ARVEKQVAGVFDNESIETMSRIAKSLKLDVIQLHGDEKPADAAALRKLTG 100
...:|:..|||.||:||.:::||..|.||||||||||.|.||..||.|..
RBAM_020810__ 51 VLTDKKHVGVFVNETIENIAQIASDLALDVIQLHGDESPEDARRLRPLVR 100
BSNT_03368___ 101 CEIWKALHHQDNTTQEIARFKDNVDGFVIDSSVKGSRGGTGVAFSWECVP 150
.||||||||.:.|.:::|:|...|||:||||||||.|||||:||||..||
RBAM_020810__ 101 SEIWKALHHGEGTLRQMAQFAPAVDGYVIDSSVKGMRGGTGIAFSWARVP 150
BSNT_03368___ 151 EYQQAA--IGKRCFIAGGVNPDSITGLLKWQPEGIDLASGIEKNGQKDQN 198
.|::.| ..|||||||||||::|||||:.:|.||||||||||||||||.
RBAM_020810__ 151 LYRKQAQNANKRCFIAGGVNPETITGLLRSRPCGIDLASGIEKNGQKDQT 200
BSNT_03368___ 199 LMSLLEERMNRYVSISE 215
|:.|||||||.|||||:
RBAM_020810__ 201 LIRLLEERMNHYVSISK 217
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