Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03365 and RBAM_020790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence pep-align/BSNT_03365___trpA.1.9828.seq
# -bsequence pep-align/RBAM_020790___trpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03365___trpA-RBAM_020790___trpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03365___trpA-RBAM_020790___trpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03365___trpA
# 2: RBAM_020790___trpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity: 204/267 (76.4%)
# Similarity: 229/267 (85.8%)
# Gaps: 2/267 ( 0.7%)
# Score: 1006.5
#
#
#=======================================
BSNT_03365___ 1 MFKLDLQPTEKLFIPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSD 50
|| :|:.:|||||||||||||:|::|:|||.|||.|||:|||:||.|:|
RBAM_020790__ 1 MF--NLRDSEKLFIPFITAGDPLPDISVELAISLQNAGASALEIGVPYTD 48
BSNT_03365___ 51 PLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPV 100
||||||||||||||||:.||||||||||||:||||||:||||||||||||
RBAM_020790__ 49 PLADGPVIQRASKRALENGMNIVKAIELGGKMKKNGVHIPIILFTYYNPV 98
BSNT_03365___ 101 LQLNKEYFFALLQENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAP 150
|||.||||||||:||.||||||||||||||..||..||...:.|||||||
RBAM_020790__ 99 LQLEKEYFFALLRENDIDGLLVPDLPLEESALLQMTCKKENIAYISLVAP 148
BSNT_03365___ 151 TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVP 200
|||.|||.|.|||.|||||||||||||||:||:.|||.|||.||..|:||
RBAM_020790__ 149 TSEDRLKIITEQACGFVYCVSSLGVTGVRSEFDPSVYSFIRKVKEFSSVP 198
BSNT_03365___ 201 VAVGFGISNREQVIKMNEISDGVVVGSALVRKIEELKDRLISAETRNQAL 250
||||||||||:||..|||||||||||||||:||||||.:|::..||..||
RBAM_020790__ 199 VAVGFGISNRKQVDGMNEISDGVVVGSALVKKIEELKTKLVNPGTRADAL 248
BSNT_03365___ 251 QEFEDYAMAFSGLYSLK 267
.|||:||..|..|||:|
RBAM_020790__ 249 LEFEEYAKTFGRLYSVK 265
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