Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03360 and RBAM_020750
See
DNA alignment /
Visit
BSNT_03360 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence pep-align/BSNT_03360___ypiA.1.9828.seq
# -bsequence pep-align/RBAM_020750___ypiA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03360___ypiA-RBAM_020750___ypiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03360___ypiA-RBAM_020750___ypiA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03360___ypiA
# 2: RBAM_020750___ypiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 361/423 (85.3%)
# Similarity: 391/423 (92.4%)
# Gaps: 0/423 ( 0.0%)
# Score: 1857.0
#
#
#=======================================
BSNT_03360___ 1 MNTLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKAIAAQLYYEWGDVE 50
|||||||||||||||||||||..|||||.||||||||||||||||||:.|
RBAM_020750__ 1 MNTLIQEAIKLVEAGETEKGLKALSKAETQLHDEDKAIAAQLYYEWGNAE 50
BSNT_03360___ 51 KAISLISDLHDLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSY 100
||::||||||||||:|:||||||||||||||||||||.|||||...||||
RBAM_020750__ 51 KALALISDLHDLYPDESELTNFYAELLIDIDEEEKALEVLETISPEDPSY 100
BSNT_03360___ 101 PESLLLMADLYQMQGLFEVSEQKLLQAKSILDNEPVIDFALGELYFAQGA 150
.||||||||||||||||||||||||||||:|.:|||||||||||||.||:
RBAM_020750__ 101 AESLLLMADLYQMQGLFEVSEQKLLQAKSMLQDEPVIDFALGELYFTQGS 150
BSNT_03360___ 151 YAKAVQYFKTTAEEQSEIGGVNVHQRLAESLSASGEFEDAIPWYEKAVDE 200
|||||.|::.||:|:.|||||||||||||||||:||||:||.|||||..|
RBAM_020750__ 151 YAKAVPYYEETAKERHEIGGVNVHQRLAESLSAAGEFEEAISWYEKAAAE 200
BSNT_03360___ 201 NPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSLYMPLSKSYEA 250
:.:|||||||||||.|||:||||||||||||.|||||:||||||:|||||
RBAM_020750__ 201 HTEPNTIFGYGFTAYQAGMVKTAIKQLSDLKGLDPSYSSLYMPLAKSYEA 250
BSNT_03360___ 251 EGVYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALA 300
||:||:|||||||||.||||||||||||||||||:|..||||||||||||
RBAM_020750__ 251 EGMYEDALKTAKEGITYDEYNKELFLYAAKMALKLGSEEEGKKLLQEALA 300
BSNT_03360___ 301 LDPGFVEALHTLLAVYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAY 350
||||:|||||||||||||||.:::|||||||||.|||||||||||||.||
RBAM_020750__ 301 LDPGYVEALHTLLAVYHKEESFEEIIDLIQEVRGYGEEDPKYNWYLAGAY 350
BSNT_03360___ 351 TELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKV 400
|.||||.|||:|||||||||::|||||||||.||||||||||||||||:|
RBAM_020750__ 351 TGLEQYAEAKKSFEAAYLHYQDDRDFLYEYAHFLLEEGLQKEALPLLKQV 400
BSNT_03360___ 401 LEMDGANEELEETILRIEDEFSR 423
|.|||.|||||||||||||||.|
RBAM_020750__ 401 LSMDGTNEELEETILRIEDEFLR 423
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.