Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03356 and RBAM_020720

See DNA alignment / Visit BSNT_03356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_03356___qcrA.1.9828.seq
#    -bsequence pep-align/RBAM_020720___qcrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: RBAM_020720___qcrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     152/167 (91.0%)
# Similarity:   160/167 (95.8%)
# Gaps:           0/167 ( 0.0%)
# Score: 840.0
# 
#
#=======================================

BSNT_03356___      1 MGGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMV     50
                     ||||.||||||||||.|||||||||||.||||||||||||||.||.|.||
RBAM_020720__      1 MGGKQDISRRQFLNYALTGVGGFMAASALMPMVRFALDPVLKPTGDQKMV     50

BSNT_03356___     51 QVVSVDELTKEPQRFDFKINQVDAWYESEESRSAWVFKNGDEIVALSPIC    100
                     ||||||||||||:||||||:||||||||||||||||:|:||||:||||||
RBAM_020720__     51 QVVSVDELTKEPKRFDFKIHQVDAWYESEESRSAWVYKHGDEIIALSPIC    100

BSNT_03356___    101 KHLGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDHYEQE    150
                     ||||||||||:||||||||||||||||||||||||||||||||||.|||:
RBAM_020720__    101 KHLGCTVNWNNDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDRYEQK    150

BSNT_03356___    151 VKDGFLYLGKAKPKGEG    167
                     |||||||||||||:|||
RBAM_020720__    151 VKDGFLYLGKAKPRGEG    167


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.