Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03356 and RBAM_020720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_03356___qcrA.1.9828.seq
# -bsequence dna-align/RBAM_020720___qcrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: RBAM_020720___qcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity: 421/505 (83.4%)
# Similarity: 421/505 (83.4%)
# Gaps: 2/505 ( 0.4%)
# Score: 1757.0
#
#
#=======================================
BSNT_03356___ 1 ATGGGCGGAAAACATGATATATCCAGACGTCAATTTTTGAATTACACGCT 50
||||||||||||||.||||||||.|||.|.||||||||.||.||..||||
RBAM_020720__ 1 ATGGGCGGAAAACAAGATATATCAAGAAGACAATTTTTAAACTATGCGCT 50
BSNT_03356___ 51 CACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGGTTC 100
|||.|||||.||.||.||||||||.||.|||..|||.|||||.|||||.|
RBAM_020720__ 51 CACCGGCGTGGGGGGATTTATGGCCGCCAGTGCGCTTATGCCCATGGTCC 100
BSNT_03356___ 101 GCTTCGCACTCGACCCGGTATTAAAATCGACAGGGA-AGCAGGATATGGT 149
|.||.||.||.|||||||||||||||.|||| |||| |.||..|.|||||
RBAM_020720__ 101 GTTTTGCGCTGGACCCGGTATTAAAACCGAC-GGGAGATCAAAAAATGGT 149
BSNT_03356___ 150 TCAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGATT 199
.|||||||||||.||.||||||.||||.||.||||||.||||.|||||.|
RBAM_020720__ 150 GCAGGTTGTCAGTGTGGATGAGCTGACGAAGGAGCCGAAGCGGTTTGACT 199
BSNT_03356___ 200 TTAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAGATCA 249
||||||||.||||||||||.||||||||.||.||.|||||.||.||.|||
RBAM_020720__ 200 TTAAAATTCATCAAGTCGACGCCTGGTACGAATCGGAAGAATCCAGGTCA 249
BSNT_03356___ 250 GCCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATTTG 299
||||||||.|.|||..|.||||||||||||.||||.|||||.||.||.||
RBAM_020720__ 250 GCCTGGGTTTACAAGCATGGGGATGAAATTATAGCGCTTTCTCCGATCTG 299
BSNT_03356___ 300 TAAACATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAACCCGA 349
|||.|||||.||.||.||.||.||||||||.|.||||||||||||.||||
RBAM_020720__ 300 TAAGCATTTGGGCTGCACTGTAAACTGGAACAATGATCCTAAAAATCCGA 349
BSNT_03356___ 350 ATAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCACC 399
|.||.|||||||||||.|||||||||||.||.||||||||.||||||||.
RBAM_020720__ 350 ACAAGTTCTTTTGTCCCTGCCATTACGGGCTGTATGAAAAAGACGGCACG 399
BSNT_03356___ 400 AATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAAGA 449
||.||.||.||||||||||||||.|||||||||||.|.||||||||||.|
RBAM_020720__ 400 AACGTTCCGGGCACGCCGCCGCTCGCGCCTCTTGACCGTTATGAGCAAAA 449
BSNT_03356___ 450 AGTAAAAGACGGCTTCCTGTATCTTGGAAAAGCAAAGCCTAAGGGGGAAG 499
||||||.||||||||..||||||||||||||||||||||||.||||||||
RBAM_020720__ 450 AGTAAAGGACGGCTTTTTGTATCTTGGAAAAGCAAAGCCTAGGGGGGAAG 499
BSNT_03356___ 500 GGTGA 504
|||||
RBAM_020720__ 500 GGTGA 504
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