Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03356 and RBAM_020720

See Amino acid alignment / Visit BSNT_03356 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence dna-align/BSNT_03356___qcrA.1.9828.seq
#    -bsequence dna-align/RBAM_020720___qcrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03356___qcrA-RBAM_020720___qcrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: RBAM_020720___qcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity:     421/505 (83.4%)
# Similarity:   421/505 (83.4%)
# Gaps:           2/505 ( 0.4%)
# Score: 1757.0
# 
#
#=======================================

BSNT_03356___      1 ATGGGCGGAAAACATGATATATCCAGACGTCAATTTTTGAATTACACGCT     50
                     ||||||||||||||.||||||||.|||.|.||||||||.||.||..||||
RBAM_020720__      1 ATGGGCGGAAAACAAGATATATCAAGAAGACAATTTTTAAACTATGCGCT     50

BSNT_03356___     51 CACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGGTTC    100
                     |||.|||||.||.||.||||||||.||.|||..|||.|||||.|||||.|
RBAM_020720__     51 CACCGGCGTGGGGGGATTTATGGCCGCCAGTGCGCTTATGCCCATGGTCC    100

BSNT_03356___    101 GCTTCGCACTCGACCCGGTATTAAAATCGACAGGGA-AGCAGGATATGGT    149
                     |.||.||.||.|||||||||||||||.|||| |||| |.||..|.|||||
RBAM_020720__    101 GTTTTGCGCTGGACCCGGTATTAAAACCGAC-GGGAGATCAAAAAATGGT    149

BSNT_03356___    150 TCAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGATT    199
                     .|||||||||||.||.||||||.||||.||.||||||.||||.|||||.|
RBAM_020720__    150 GCAGGTTGTCAGTGTGGATGAGCTGACGAAGGAGCCGAAGCGGTTTGACT    199

BSNT_03356___    200 TTAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAGATCA    249
                     ||||||||.||||||||||.||||||||.||.||.|||||.||.||.|||
RBAM_020720__    200 TTAAAATTCATCAAGTCGACGCCTGGTACGAATCGGAAGAATCCAGGTCA    249

BSNT_03356___    250 GCCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATTTG    299
                     ||||||||.|.|||..|.||||||||||||.||||.|||||.||.||.||
RBAM_020720__    250 GCCTGGGTTTACAAGCATGGGGATGAAATTATAGCGCTTTCTCCGATCTG    299

BSNT_03356___    300 TAAACATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAACCCGA    349
                     |||.|||||.||.||.||.||.||||||||.|.||||||||||||.||||
RBAM_020720__    300 TAAGCATTTGGGCTGCACTGTAAACTGGAACAATGATCCTAAAAATCCGA    349

BSNT_03356___    350 ATAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCACC    399
                     |.||.|||||||||||.|||||||||||.||.||||||||.||||||||.
RBAM_020720__    350 ACAAGTTCTTTTGTCCCTGCCATTACGGGCTGTATGAAAAAGACGGCACG    399

BSNT_03356___    400 AATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAAGA    449
                     ||.||.||.||||||||||||||.|||||||||||.|.||||||||||.|
RBAM_020720__    400 AACGTTCCGGGCACGCCGCCGCTCGCGCCTCTTGACCGTTATGAGCAAAA    449

BSNT_03356___    450 AGTAAAAGACGGCTTCCTGTATCTTGGAAAAGCAAAGCCTAAGGGGGAAG    499
                     ||||||.||||||||..||||||||||||||||||||||||.||||||||
RBAM_020720__    450 AGTAAAGGACGGCTTTTTGTATCTTGGAAAAGCAAAGCCTAGGGGGGAAG    499

BSNT_03356___    500 GGTGA    504
                     |||||
RBAM_020720__    500 GGTGA    504


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