Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03354 and RBAM_020700

See DNA alignment / Visit BSNT_03354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_03354___qcrC.1.9828.seq
#    -bsequence pep-align/RBAM_020700___qcrC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03354___qcrC-RBAM_020700___qcrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03354___qcrC-RBAM_020700___qcrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03354___qcrC
# 2: RBAM_020700___qcrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     230/255 (90.2%)
# Similarity:   249/255 (97.6%)
# Gaps:           0/255 ( 0.0%)
# Score: 1262.0
# 
#
#=======================================

BSNT_03354___      1 MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_020700__      1 MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGA     50

BSNT_03354___     51 VFLIGFLVLTIVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAG    100
                     |||:|||||||||:|||||:||||||||||||||||||||||||||||||
RBAM_020700__     51 VFLVGFLVLTIVHEPPLERVADPTDTGYIPLPDWYFLFLYQLLKYEYAAG    100

BSNT_03354___    101 SFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAV    150
                     |:||:||||:||||||:||||||||||:|||||||||||||||||:.|.|
RBAM_020700__    101 SYTVIGAMIIPGLAFGSLLLAPFLDRGSERRPWKRPVAVGMMLLALCATV    150

BSNT_03354___    151 FLTWQSVATHDWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNL    200
                     |||||||||||||||||||||.|||.|||.::||||||||||||||||||
RBAM_020700__    151 FLTWQSVATHDWAKAEEQGKIKKEAAIDTESDGYKVFKEQGCISCHGDNL    200

BSNT_03354___    201 QGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDKQLEELAKFIS    250
                     |||:|||||||:||.|:|||||||:|||:||||:||||||||::||||||
RBAM_020700__    201 QGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDKQLDQLAKFIS    250

BSNT_03354___    251 ETTAK    255
                     |||||
RBAM_020700__    251 ETTAK    255


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